Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02715 ATGTATAGAACTCGTGACATCAAATTCGTTGCTTCACATTCGCCCTCACTACAATTCAACGGGCTTCACAGCAGAAATTCTAGGTTGAAGATGTCCTCCGATTCTTCCGTTGCTTCTCTTCCTGAAAACCCCATAGTTCTGGGATGCGGATCGGTGTCGCTGGATTTCTTGGCTACAGTTGCTGCTTATCCGAAGCCAGATGACAAGATTAGAAGCACCAATTTGAAGGTTGAAGGGGGTGGTAACACAGGAAATGCGTTAACATGTCTTGCTCGCTTAGGCCTAAAACCAAGGATCATCTCCAAGGTTGCAGATGACACTCGAGGCAGGGGCATAGTAGACGAGCTAGACGCTGATGGTGTAGATACATCATATTTTGTGGTTTCCAAGGAGGGCACTTCACCATTTACCTACGTCATTGTAGACAATCAGACGAAGACCCGTACTTGTATACATACTCCAGGACATCCTCCAATGGTGCTAGAAGATCTTCCTGAATCAAGTTTGTTGTCTGCAATAAATGGAGCAAGAATCGCTTATTTTGATGGAAGGTTGCATGAAACCGCCCTTCTTGTTGCTCAAGAGGCAGTTCGGGAAAATATTCCCATCTTAATTGATGCAGAAAGGCCAAGGGAAGGGCTAAATGATCTCCTGAAATCTGCTGATTACGTTGTATGCTCGGAAAAATTTCCACAGGTGTGGACAGAAGCACCAACTATTCCAAGAGCACTTGTTTCTATGCTTTTAAGGTTGCCCAAGATCAAATTTGTGATTGTAACCTTGGGAAAAGACGGTTGCGTAATGCTTGAGAGAAATGCTAGTGAGGGTCATCCAACAGAAGAAGTGGATGTAGACGGGTTACTGGAATCGTTAGAGATGAGAAAGAACGAGAACATAACCATCCCAACTTGTATATCATCGTCAGTGACAAAATTGAAGGCTGAAGGGATAGGAACAGTTTGTGGGAGGTTATATGTCGGAACAGCTGAGAACATACCACCATCAGAGCTTATTGATACCACTGGTGCTGGAGATGCGTTTATTGGAGCAGTTCTCTATGCTATCTGTGCCAATTTTTCACCGGAGAAAATGCTGCCTTTTGCTGCTACTGTGGCTGCTGCCAAATGCAGAGCTTTAGGAGCACGAAGCGGTCTTCCATACCGTGGAGACTCGCGTCTGGCATCTTTCTTGCATTA 1196 0.4498 MYRTRDIKFVASHSPSLQFNGLHSRNSRLKMSSDSSVASLPENPIVLGCGSVSLDFLATVAAYPKPDDKIRSTNLKVEGGGNTGNALTCLARLGLKPRIISKVADDTRGRGIVDELDADGVDTSYFVVSKEGTSPFTYVIVDNQTKTRTCIHTPGHPPMVLEDLPESSLLSAINGARIAYFDGRLHETALLVAQEAVRENIPILIDAERPREGLNDLLKSADYVVCSEKFPQVWTEAPTIPRALVSMLLRLPKIKFVIVTLGKDGCVMLERNASEGHPTEEVDVDGLLESLEMRKNENITIPTCISSSVTKLKAEGIGTVCGRLYVGTAENIPPSELIDTTGAGDAFIGAVLYAICANFSPEKMLPFAATVAAAKCRALGARSGLPYRGDSRLASFLH 398
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02715 398 ProSitePatterns pfkB family of carbohydrate kinases signature 2. 339 352 IPR002173 GO:0016773
Bva04g02715 398 Gene3D - 45 383 IPR029056 -
Bva04g02715 398 SUPERFAMILY Ribokinase-like 46 389 IPR029056 -
Bva04g02715 398 PANTHER PFKB FAMILY CARBOHYDRATE KINASE 31 397 - -
Bva04g02715 398 PANTHER PHOSPHOTRANSFERASE SYSTEM TRANSPORT PROTEIN 31 397 - -
Bva04g02715 398 CDD ribokinase_group_B 45 387 - -
Bva04g02715 398 Pfam pfkB family carbohydrate kinase 50 279 IPR011611 -
Bva04g02715 398 Pfam pfkB family carbohydrate kinase 329 386 IPR011611 -
Bva04g02715 398 PRINTS Ribokinase signature 75 94 IPR002139 GO:0016301
Bva04g02715 398 PRINTS Ribokinase signature 257 268 IPR002139 GO:0016301
Bva04g02715 398 PRINTS Ribokinase signature 48 69 IPR002139 GO:0016301
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02715 Bva-Chr4 23712607 23717651 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02715 - - mtr:MTR_1g069320 573.163