Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02676 ATGGCGGCAAGGTGGACATGGAAGGCCGGCGAGTCCTTTTCCAAGAGCTTGCTCGAGGAGGTGCAGAAATGGGGTTGTATGAAGCAGACAGGGATCAGCTTGAAATACATGATGGAATTTGGCTCCACACCCACTGACAAGAATCTGCTCATTTCTGCTCAGTTCCTTCACAGGGAGCTCCCCATTAGGATTGCTAGGAGAGCTATTGAGCTGGAGAATCTCCCTTACGGCTTATCTGAGAAACCTGCTGTTTTGAAGGTGCGGGATTGGTACCTGGATTCTTTCCGTGACATAAGATCTTTCCCTGAGATCAAGGATATGAATGATGAGAAAGAATTCACAAAAGTGATTAAGGCAATCAAGGTGAGACACAACAATGTGGTACCTACAATGGCCTTGGGTGTTAAGCAGTTAAAGAAAGATCTGGATTCAAAGATTGTGTACCAAGATCTTGATGAGATTCATCAGTTCCTTGATCGCTTTTACATGTCAAGAATTGGAATCCGCATGCTTATTGGGCAGCATGTTGAGTTGCACAATCCCAATCCACCTCCACATTGTGTAGGttatatacatacaaaaaTGTCTCCTGTGGACGTGGTAAGGGATGCCATCGAGGATGCCCGTGCCATATGTAGTCGTGAATATGGCAGTTCCCCTGAGGTTAAAATTTATGGGGATCCTGATTTTACTTTCCCCTATGTTCCATCACACTTGCATCTTATGGCGTTTGAGTTGGTTAAGAACTCACTACGGGCTGTGGAAGAGCGTTTTAGGGATGCTGAAGAAGATGCAACTCctgttaaaataatagttgCTGACGGAATAGAAGATGTTACCATAAAGGTTTCAGACGAAGGAGGTGGGATTCCAAGGAGTGGTCTTCCAAGAATTTTTACATACCTGTATAGTACAGCCAACAATCCATTAAAGGATGATGATGTGGATCTTGGAACAGCTGATAATGTGACAATGGCTGGATATGGATATGGGCTTCCTATTAGTCGTCTATATGCTCGGTATTTTGGGGGTGATCTTCAAGTCATCTCCATGGAAGGATTCGTCCTCTACATAAAGCCCTCTTCCTGTGCTGTTTGCAGTCACAACTCACAAGCATTCATTTTCCCCTTACTACTCACCGAGCAACATCTCCCATCTGTGTGTGTTCTCGAGATCTGCGCTTTTTCTTCAAGCGTTATTCTTACGCTTCCTCTAGCAACAGAGCTTCGTCAAGTGCTGCCAGCTGATATGGCGCCTCCAAATGAGACTACTCCAAACAGGGCTCCCATCTCTCATCATGCTCCACATCCACCTCTCAATGAGAGGATTATTTCATCCATGACCAGGAGATCTGTTGCTGCACACCCTTGGCATGATCTTGAGATAGGTCCTGATGCTCCCAAGATCTTCAACTGTGTGGTTGAAATTGCGAAAGGGAGCAAGGTGAAGTATGAACTTGACAAAAAAACTGGACTTATTAAGGTTGACCGCGTGCTTTATTCTTCAGTTGTGTACCCCCACAACTACGGGTTTATCCCACGTACCATTTGTGAGGACAGCGATCCTATTGATGTCTTGGTCATTATGCAGGAGCCAGTTCTTCCCGGTTGCTTTCTTCGTGCTAAGGCTATTGGTCTCATGCCCATGATTGATCagGGTGAGAAAGATGACAAGATAATTGCTGTTTGTGCTGATGATCCTGAGTATCGAGACTTCAATGATATCAAGGAGCTTCCTCCACATCGTTTAGCTGAAATTCGTCGGTTCTTTGAAGACtacaaaaagaatgagaacAAGGAAGTTGCAGTTAACGACTTCCTTCCTTCCACAACTGCCTATGAAGCCATTCAGCACTCCATGGATCTGTATGCGGACTACATCGTGGAGAGCTTGAGGCGGTA 1901 0.4435 MAARWTWKAGESFSKSLLEEVQKWGCMKQTGISLKYMMEFGSTPTDKNLLISAQFLHRELPIRIARRAIELENLPYGLSEKPAVLKVRDWYLDSFRDIRSFPEIKDMNDEKEFTKVIKAIKVRHNNVVPTMALGVKQLKKDLDSKIVYQDLDEIHQFLDRFYMSRIGIRMLIGQHVELHNPNPPPHCVGYIHTKMSPVDVVRDAIEDARAICSREYGSSPEVKIYGDPDFTFPYVPSHLHLMAFELVKNSLRAVEERFRDAEEDATPVKIIVADGIEDVTIKVSDEGGGIPRSGLPRIFTYLYSTANNPLKDDDVDLGTADNVTMAGYGYGLPISRLYARYFGGDLQVISMEGFVLYIKPSSCAVCSHNSQAFIFPLLLTEQHLPSVCVLEICAFSSSVILTLPLATELRQVLPADMAPPNETTPNRAPISHHAPHPPLNERIISSMTRRSVAAHPWHDLEIGPDAPKIFNCVVEIAKGSKVKYELDKKTGLIKVDRVLYSSVVYPHNYGFIPRTICEDSDPIDVLVIMQEPVLPGCFLRAKAIGLMPMIDQGEKDDKIIAVCADDPEYRDFNDIKELPPHRLAEIRRFFEDYKKNENKEVAVNDFLPSTTAYEAIQHSMDLYADYIVESLRR 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02676 633 PANTHER [PYRUVATE DEHYDROGENASE (ACETYL-TRANSFERRING)] KINASE, MITOCHONDRIAL 10 354 - -
Bva04g02676 633 SUPERFAMILY alpha-ketoacid dehydrogenase kinase, N-terminal domain 19 182 IPR036784 -
Bva04g02676 633 CDD pyrophosphatase 469 621 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Bva04g02676 633 PANTHER PYRUVATE DEHYDROGENASE KINASE 10 354 IPR039028 GO:0004672
Bva04g02676 633 Gene3D Inorganic pyrophosphatase 451 629 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Bva04g02676 633 ProSitePatterns Inorganic pyrophosphatase signature. 519 525 - -
Bva04g02676 633 Gene3D - 8 186 IPR036784 -
Bva04g02676 633 Hamap Inorganic pyrophosphatase [ppa]. 468 624 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Bva04g02676 633 Coils Coil 244 264 - -
Bva04g02676 633 SMART HKATPase_4 234 364 IPR003594 -
Bva04g02676 633 ProSiteProfiles Histidine kinase domain profile. 236 353 IPR005467 -
Bva04g02676 633 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 236 353 IPR003594 -
Bva04g02676 633 Pfam Inorganic pyrophosphatase 472 623 IPR008162 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Bva04g02676 633 Gene3D - 194 361 IPR036890 -
Bva04g02676 633 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 191 353 IPR036890 -
Bva04g02676 633 SUPERFAMILY Inorganic pyrophosphatase 448 628 IPR036649 GO:0000287|GO:0004427|GO:0005737|GO:0006796
Bva04g02676 633 MobiDBLite consensus disorder prediction 416 435 - -
Bva04g02676 633 CDD HATPase_PDK-like 196 359 - -
Bva04g02676 633 Pfam Mitochondrial branched-chain alpha-ketoacid dehydrogenase kinase 31 192 IPR018955 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02676 Bva-Chr4 23504999 23512694 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02676 K00898 - tcc:18603766 613.609
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02676 04 23504999 23512694 Bva13g01840 13 15161561 15164289 BWGD