Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02670 ATGGCCATAGCCGCCACAATTTCTCTCCCTCTCACATCGCCGGCTCGTCGCTCTCTTACATCCGTTAATCCATTTCGtccttcttcaacttctttttctaCTTTCCACTACAATTTGTTCACTGCTCCTTATGCTGTAAAATACCCTAATTCTCGCCTCGTTGCTTCTTCAATGAGCATTGAAGCCCCTGTGAAGACCTCGTCAACCTCGTTCCTGGACCGAAAAGAAAGTGGGTTTCTCCATTTTGCCAAGTATCATGGTCTCGGCAATGACTTCGTTTTGATTGACAATAGAGACTCTTCGGAGCCCAAGATCGGTACGGAGAAAGCTGTGCAACTATGTGACCGGAACTTTGGTATTGGTGCTGATGGAGTTATGTTTGTCATGCCGGGCATCAATGGCACCGACTACACTATGAGGATCTTTAATTCTGATGGTAGTGAACCAGAGATGTGTGGTAATGGAATACGATGCTTTGCCAAATTCATTGCTCAGCTTGAGAATTTACATGGGAGGCATAGTTTCACTGTGCATACTGGTGCTGGCCTGATTGTTCCAGAAATTGTTGAGGATGGAAACGTTAGAGTTGATATGGGGGAACCGATTCTTAAAGCATCAGAAGTGCCTACTAGATTACCTTCAAATAAGGGGCATGCCGTTGTTAAGTCAGAGCTAGATGTAGATGGAGTTATCTGGGATGTGACATGTGTTAGCATGGGAAATCCACACTGTGTAACTTTTGGTACAAAAGGAAGCGAGAATTTGCTGGTTGATGAATTGAAGCTAGCAGATGTTGGTCCACGTTTTGAACATCATGCAATGTTCCCTGCTAGAACTAACACAGAGTTTGTGGAAGTTCTTTCTGATTCTCATCTGAAGATGCGTGTTTGGGAGCGCGGGGCAGGAGCAACTCTGGCTTGTGGAACTGGAGCTTGTGCTGTAGTTGTTGCAGCAGTCCTTGAGGGTCGCGCTGGAAGGAATTGCACAGTTGATCTGCCGGGAGGGCCTTTGCAGATCGAATGGAGGGAGGAAGACAATCATGTGTATATGACAGGCCCAGCTGAAGTAGTTTTCTACGGATCTCTGCCCCTTTG 1094 0.4552 MAIAATISLPLTSPARRSLTSVNPFRPSSTSFSTFHYNLFTAPYAVKYPNSRLVASSMSIEAPVKTSSTSFLDRKESGFLHFAKYHGLGNDFVLIDNRDSSEPKIGTEKAVQLCDRNFGIGADGVMFVMPGINGTDYTMRIFNSDGSEPEMCGNGIRCFAKFIAQLENLHGRHSFTVHTGAGLIVPEIVEDGNVRVDMGEPILKASEVPTRLPSNKGHAVVKSELDVDGVIWDVTCVSMGNPHCVTFGTKGSENLLVDELKLADVGPRFEHHAMFPARTNTEFVEVLSDSHLKMRVWERGAGATLACGTGACAVVVAAVLEGRAGRNCTVDLPGGPLQIEWREEDNHVYMTGPAEVVFYGSLPL 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02670 364 SUPERFAMILY Diaminopimelate epimerase-like 224 362 - -
Bva04g02670 364 SUPERFAMILY Diaminopimelate epimerase-like 80 209 - -
Bva04g02670 364 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 215 348 - -
Bva04g02670 364 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 45 363 - -
Bva04g02670 364 TIGRFAM DapF: diaminopimelate epimerase 81 362 IPR001653 GO:0008837|GO:0009089
Bva04g02670 364 ProSitePatterns Diaminopimelate epimerase signature. 143 157 IPR018510 GO:0005737|GO:0008837|GO:0009089
Bva04g02670 364 PANTHER DIAMINOPIMELATE EPIMERASE, CHLOROPLASTIC 45 363 IPR001653 GO:0008837|GO:0009089
Bva04g02670 364 Pfam Diaminopimelate epimerase 82 202 IPR001653 GO:0008837|GO:0009089
Bva04g02670 364 Pfam Diaminopimelate epimerase 236 356 IPR001653 GO:0008837|GO:0009089
Bva04g02670 364 Hamap Diaminopimelate epimerase [dapF]. 80 364 IPR001653 GO:0008837|GO:0009089
Bva04g02670 364 Gene3D Diaminopimelate Epimerase; Chain A, domain 1 54 210 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02670 K01778 - gmx:100784731 588.571