Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02656 atgaagaaacaaCTGACAGGAATGTGGGATGATACTCCCCTACATTCAGCAGTCCGAGCAGGACATTTAGATTTGGTGCTAGGAATCATTGCTGAGAAGGAAGAGCAGGAAGTAAAAGAGTTGCTTTCTAAGCAAAACCGCTCTGGTGAAACTGCTTTATATATTGCTGCTGAAAATGGTCATATAGATATGGTGAAGGAACTGCTCAAGTACTGTGATATTGGTTTGGCCAGTTTCAAAGCTAGAAATGGGTTTGATGCATTCCAGATTGCTGCTAAAAATGGTGACCTGGAGATACTGAAGGTCCTAATAGAGGCCATTCCTGAGCTCTCAATGACTGTTGATCAATCCAATACTACTGCATTGCACACCGCCGCAGCGCAAGGACACATCGAGGTAGTAAATTTCCTCTTGGACAAAGGAAGCAACTTCGTCACAATTGCAAAAAGCAACGGAAAAACTGCCTTACATTCTGCTGCGAGATATGGCCATGTGGAGGTCATCAAGGCCCTTCTAAGCAGAGAACCTGAACTTGCTATGCGAATCGATAAGAAGGGGCAGACAGCCCTCCATATGGCAGTTAAAGGGCAAAATCTTAAGTTGGTGGAGGAGCTTTTGAAATCAAATCCTTCTTTGACTAATGTTGTTGATACCAAGGGCAACACTCCACTGCATATTGCTGCACGGAAAGGTCGTGTAGAGATTGTAGGGAAGCTATTAGATTGCAGCGAGACAGACACAGATGTTATTAATAAATCTGGAGAAACTGCTCTTGACACTGCAGAGAAAAACGGGCAGTCAGAGATTGTCAATATTCTGCAAGTTCATGGAGCTCAAAGTGCCAAGTCTATCAAGTCAACTGCTACAAACACCGCCCTTGAACTGAAACGAACAGTTAGTGACATAAAAACTGGGGTTCATAACCAGCTTCAACACACATTTAAAACACAAAGACGCGTGCAAGGTATAGCGAAACGACTTAACAAAATGCATGCCGAGGGGCTTAACAATGCCATCAACTCCAACACTGTTGTTGCTGTCCTCATAGCAACAGTTGCTTTTGCTGCCATATTCAGCATCCCAGGCCAGTATCCTAATGACCTAGAGCATCTTGCTCCTGGAAAGTCTCTTGGGGAAGCAAATATTGCTCCAAAAGTTGGATTTATGATATTCATCATCTTTGATTCTACTGCCCTATTCATATCGTTGGCTGTTGTGATTGTCCAAACATCAATTGTTGTTATTGAGAGGAAAGCGAAGAAACAAATGATGGCTATTATAAATAAGTTGATGTGGTTAGCTTGTGTGCTAATTTCAGTGGCATTTATCGCAATGTCATATATTGTTGTCGGGGATCAGAAGTGGCTGGCCATAGCATCTACAGCCATAGGAACTGTGATTATGGCTGCAACTCTGGGAACATTGTGTTACTGGGTCATTGCTCACAGACTTGAGGCCTCCAAATTGCGAAGTCTTAGGAAATCGACAATGAGCAGTAGACAGTCAATGTCTATGTCAATGATGTCAGGTTCTGAGAATGAGTACAAGACAGTTAAAGgcaaacatta 1568 0.4235 MKKQLTGMWDDTPLHSAVRAGHLDLVLGIIAEKEEQEVKELLSKQNRSGETALYIAAENGHIDMVKELLKYCDIGLASFKARNGFDAFQIAAKNGDLEILKVLIEAIPELSMTVDQSNTTALHTAAAQGHIEVVNFLLDKGSNFVTIAKSNGKTALHSAARYGHVEVIKALLSREPELAMRIDKKGQTALHMAVKGQNLKLVEELLKSNPSLTNVVDTKGNTPLHIAARKGRVEIVGKLLDCSETDTDVINKSGETALDTAEKNGQSEIVNILQVHGAQSAKSIKSTATNTALELKRTVSDIKTGVHNQLQHTFKTQRRVQGIAKRLNKMHAEGLNNAINSNTVVAVLIATVAFAAIFSIPGQYPNDLEHLAPGKSLGEANIAPKVGFMIFIIFDSTALFISLAVVIVQTSIVVIERKAKKQMMAIINKLMWLACVLISVAFIAMSYIVVGDQKWLAIASTAIGTVIMAATLGTLCYWVIAHRLEASKLRSLRKSTMSSRQSMSMSMMSGSENEYKTVKGKH 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02656 522 Gene3D - 3 108 IPR036770 -
Bva04g02656 522 ProSiteProfiles Ankyrin repeat profile. 185 217 IPR002110 GO:0005515
Bva04g02656 522 ProSiteProfiles Ankyrin repeat profile. 219 252 IPR002110 GO:0005515
Bva04g02656 522 ProSiteProfiles Ankyrin repeat region circular profile. 151 174 - -
Bva04g02656 522 Pfam Domain of unknown function 333 449 IPR026961 -
Bva04g02656 522 ProSiteProfiles Ankyrin repeat region circular profile. 48 70 - -
Bva04g02656 522 ProSiteProfiles Ankyrin repeat region circular profile. 219 241 - -
Bva04g02656 522 PANTHER ANKYRIN REPEAT PLANT PROTEIN 1 518 - -
Bva04g02656 522 MobiDBLite consensus disorder prediction 495 522 - -
Bva04g02656 522 ProSiteProfiles Ankyrin repeat profile. 117 149 IPR002110 GO:0005515
Bva04g02656 522 ProSiteProfiles Ankyrin repeat region circular profile. 185 212 - -
Bva04g02656 522 SMART ANK_2a 83 112 IPR002110 GO:0005515
Bva04g02656 522 SMART ANK_2a 117 146 IPR002110 GO:0005515
Bva04g02656 522 SMART ANK_2a 253 282 IPR002110 GO:0005515
Bva04g02656 522 SMART ANK_2a 185 214 IPR002110 GO:0005515
Bva04g02656 522 SMART ANK_2a 151 180 IPR002110 GO:0005515
Bva04g02656 522 SMART ANK_2a 9 38 IPR002110 GO:0005515
Bva04g02656 522 SMART ANK_2a 48 76 IPR002110 GO:0005515
Bva04g02656 522 SMART ANK_2a 219 249 IPR002110 GO:0005515
Bva04g02656 522 Pfam Ankyrin repeats (3 copies) 151 211 IPR002110 GO:0005515
Bva04g02656 522 Pfam Ankyrin repeats (3 copies) 10 75 IPR002110 GO:0005515
Bva04g02656 522 Pfam Ankyrin repeats (3 copies) 217 278 IPR002110 GO:0005515
Bva04g02656 522 Pfam Ankyrin repeats (3 copies) 80 144 IPR002110 GO:0005515
Bva04g02656 522 SUPERFAMILY Ankyrin repeat 13 278 IPR036770 -
Bva04g02656 522 MobiDBLite consensus disorder prediction 495 513 - -
Bva04g02656 522 ProSiteProfiles Ankyrin repeat profile. 151 183 IPR002110 GO:0005515
Bva04g02656 522 ProSiteProfiles Ankyrin repeat profile. 48 70 IPR002110 GO:0005515
Bva04g02656 522 Gene3D - 109 279 IPR036770 -
Bva04g02656 522 ProSiteProfiles Ankyrin repeat region circular profile. 117 143 - -
Bva04g02656 522 PANTHER PROTEIN PHOSPHATASE 1 REGULATORY SUBUNIT 1 518 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02656 Bva-Chr4 23420562 23423943 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02656 1 499 Miscellaneous Gene Families AT1G07710 67.400 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02656 - - gmx:100802370 796.964