Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02589 ATGATCAGCACAGCCAACGGTATGATGTCGGCGTCTTCATCGGCTACGGCACAATCGCCCGGCCTCAAGACTTATTTTAAGACCCCCGAAGGTCGTTACAAACTTCACTATGAGAAGACTCCCCCTTCTGGTCTCCTTCACTATGCTCATGGCAAAACCGTCACTCAGATAACCCTGGCACATCTTAAGGACAAGCCAGCGCCTTCTACCCCAACTGCCTCATCTTCAAGTTTTAGTGCCAGCAGTGGCGTACGGTCAGCAGCAGCTAGATTGTTGGGAGGAAGCAATGGAAGCCGAGCTCTTAGTTTTGTTGGAGGGAATGGTAACAGCAAAAATGTTGGAGGAAACAGTAGGATTGGTTCAATTAGTGCCTCAAGTTCAAGTAATCCAATGGGTAGCTCAAATTTTGATGGAAAAGGGACTTATGTGATATTCAATGTTGGTGATGCAATTTTCATAAGTGATTTGAATTCTCAAGATAAgGACCCAGTGAAGTCTATTCATTTTAGTAATTCAAATCCCGTGTGTCATGCCTTTGATCAAGATGCTAAGGATGGGCATGATTTGCTCATTGGTTTGAACACTGGTGATGTCTACTCAGTGTCACTGAGACAGCAATTACAGGATGTTGGGAAAAAGCTCGTTGGAGCCCAGCATTACAACAAAGATGGTTCTGTCAATAGCAGTCGTTGTACTTGTATTGCTTGGGTGCCTAGTGGTGATGGTGCTTTTGTTGTTGCTCATGCCGATGGGAATTTGTACGTATATGAAAAGAACAAAGATAGTGCTGGTGATTCTTCATTCCCAGTCATCAAAGATCAAACACAATTTTCTGTTGCCCATGCACGTTACAGTAAGAGTAATCCCATAGCAAGATGGCATATATGCCACGGTTCAATTAACAGTATTTCTTTCTCGTTTGATGGGGCATACTTAGCAACTGTTGGAAGAGAtgGTTATTTACGAGTGTTTGATTACTCAAAAGAACAACTTATATGTGGTGGCAAAAGTTATTACGGCGCTTTGTTGTGTTGTGCTTGGAGCGCGGATGGAAAATATATCTTGACTGGTGGAGAAGATGATTTGGTTCAAGTTTGGAGCATGGAAGATCGAAAGGTTGTGGCATGGGGTGAGGGCCACAACTCATGGGTCAGTGGAGTAGCTTTTGATTCATATTGGTCCTCACCAAATTCAAATGACAATGGGGAGACCATCATGTATCGGTTCGGTTCTGTTGGTCAGGATACACAATTACTTCTATGGGACTTGGAAATGGATGAGATTGTAGTGCCGTTGCGGCGTGCTCCTGGTGGATCCCCCACTTACAGTACTGGAAGTCAATCAGCCCACTGGGACAGTGTTGTTCCGTTGGGGACCCTGCAGCCTGCTCCCAGCATGCGGGATGTTCCAAAAATCTCTCCGCTGGTTGCTCATCGTGTGCACACTGAACCACTCTCGGGTTTGATATTTACCCAGGAATCTGTTCTTACTGCCTCCCGGGAGGGGCATATAAAGATCTGGACAAGACCTGGTCTTACCGAGAACCAGCCAAACAACTCTGAAACGTTGTTAGCTACCAGCCTCAAGGACAAACCTTCACTTTTAAGCAAGATCGACAATTCTAGTTACAAACAATG 1637 0.4496 MISTANGMMSASSSATAQSPGLKTYFKTPEGRYKLHYEKTPPSGLLHYAHGKTVTQITLAHLKDKPAPSTPTASSSSFSASSGVRSAAARLLGGSNGSRALSFVGGNGNSKNVGGNSRIGSISASSSSNPMGSSNFDGKGTYVIFNVGDAIFISDLNSQDKDPVKSIHFSNSNPVCHAFDQDAKDGHDLLIGLNTGDVYSVSLRQQLQDVGKKLVGAQHYNKDGSVNSSRCTCIAWVPSGDGAFVVAHADGNLYVYEKNKDSAGDSSFPVIKDQTQFSVAHARYSKSNPIARWHICHGSINSISFSFDGAYLATVGRDGYLRVFDYSKEQLICGGKSYYGALLCCAWSADGKYILTGGEDDLVQVWSMEDRKVVAWGEGHNSWVSGVAFDSYWSSPNSNDNGETIMYRFGSVGQDTQLLLWDLEMDEIVVPLRRAPGGSPTYSTGSQSAHWDSVVPLGTLQPAPSMRDVPKISPLVAHRVHTEPLSGLIFTQESVLTASREGHIKIWTRPGLTENQPNNSETLLATSLKDKPSLLSKIDNSSYKQ 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02589 545 MobiDBLite consensus disorder prediction 1 25 - -
Bva04g02589 545 PANTHER WD REPEAT PROTEIN 4 530 - -
Bva04g02589 545 SMART WD40_4 328 367 IPR001680 GO:0005515
Bva04g02589 545 SMART WD40_4 286 325 IPR001680 GO:0005515
Bva04g02589 545 SMART WD40_4 370 422 IPR001680 GO:0005515
Bva04g02589 545 SMART WD40_4 471 508 IPR001680 GO:0005515
Bva04g02589 545 SMART WD40_4 211 257 IPR001680 GO:0005515
Bva04g02589 545 PANTHER WD REPEAT-CONTAINING PROTEIN 20-LIKE 4 530 - -
Bva04g02589 545 ProSiteProfiles Trp-Asp (WD) repeats profile. 335 376 IPR001680 GO:0005515
Bva04g02589 545 SUPERFAMILY WD40 repeat-like 164 508 IPR036322 GO:0005515
Bva04g02589 545 MobiDBLite consensus disorder prediction 1 23 - -
Bva04g02589 545 Pfam WD domain, G-beta repeat 342 367 IPR001680 GO:0005515
Bva04g02589 545 Pfam WD domain, G-beta repeat 296 325 IPR001680 GO:0005515
Bva04g02589 545 Gene3D - 11 515 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02589 Bva-Chr4 23118841 23125055 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02589 302 429 Miscellaneous Gene Families AT5G08390 22.656 4.73e-07 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02589 K24741 - gmx:100782580 942.954
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02589 04 23118841 23125055 Bva04g02589 04 23118841 23125055 ECH