Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02559 ATGGGTTTATATGAGCACTCAGATGTTATTCAGTGGGGTCTCCAGCTTCTTGATGGTGACCCTACTTATGGTCCTGGATACTATAGTGGCATAATTCAACAAGATTCTGGTGACGTCTATAACGGACACTACTATGGTGATATAATTCAACAAGGTTATTATCATACCGATTGTAACCATGTAGAGAATGATGAGATTATTGCACGCACTCTTCAGGAAGAGCTTTCACAACTAGAAATTGCGGAATGTTCCAGATATTCACAAGGGGGTGAAGAGCAAATTCATTCTTCCGATTCAGCATATGATTGGCATAACTCTTCAATGATGAACTATTATTCAGGAGGGCATGATTATTCCCAAGATGGAGTTGATGATGTAGAACGTTCTAGTTCATGCTCTAGCCCCTGTGATCACTCACTGGAGCTAACTGATGATTATCCACTTGAGGATGAAGTAGGGAGGATATTGAGCGAGATTGATCCTGCTCCTCATGTCCCCCGAATTAATGGGGAAATTCCTTCAATTGATGAAGCAACTTCTGATCATCAAAGGCTTCTGGATAGATTACAATTATATGACTTTGTGGAGCACAAGGTGCGCGGTGATGGTAATTGTCAGTTCCGTGCATTATCtgatcaattttatcttacaCCTGACCATCACAAGTTTGTGAGACGACAAGTTGTGAACCAGCTGAAGTCTCATCCGGAGATTTACGAGGGATATGTTCCCATGGCATATGATGAGTATTTGGAGAAGATGTCCCAGAGTGGAGAATGGGGTGATCACGTCACTCTCCAAGCAGCTGCAGATTCGTATGGtgtgaaaatatttgtgaTGACTTCTTTCAAGGATACTTATTGCATAGAGATTCTTCCTAATTTTGGAAAGCCAAAACGAGTGATTTTCCTGAGTTTTTGGGCAGAGGTACACTACAACTCAATCTATCCTCGAGGAgATACAGGTACAGATATCTCTTCAAGCGAgttgaggaagaagagaaggtgGTGGAACTTCGGAAGTAAGCATTA 1031 0.3977 MGLYEHSDVIQWGLQLLDGDPTYGPGYYSGIIQQDSGDVYNGHYYGDIIQQGYYHTDCNHVENDEIIARTLQEELSQLEIAECSRYSQGGEEQIHSSDSAYDWHNSSMMNYYSGGHDYSQDGVDDVERSSSCSSPCDHSLELTDDYPLEDEVGRILSEIDPAPHVPRINGEIPSIDEATSDHQRLLDRLQLYDFVEHKVRGDGNCQFRALSDQFYLTPDHHKFVRRQVVNQLKSHPEIYEGYVPMAYDEYLEKMSQSGEWGDHVTLQAAADSYGVKIFVMTSFKDTYCIEILPNFGKPKRVIFLSFWAEVHYNSIYPRGDTGTDISSSELRKKRRWWNFGSKH 343
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02559 343 Coils Coil 61 81 - -
Bva04g02559 343 ProSiteProfiles OTU domain profile. 194 318 IPR003323 -
Bva04g02559 343 Gene3D - 175 324 - -
Bva04g02559 343 Pfam OTU-like cysteine protease 200 286 IPR003323 -
Bva04g02559 343 PANTHER OTU DOMAIN-CONTAINING PROTEIN DDB_G0284757-LIKE ISOFORM X1 28 337 - -
Bva04g02559 343 SUPERFAMILY Cysteine proteinases 180 319 IPR038765 -
Bva04g02559 343 PANTHER OTU DOMAIN CONTAINING PROTEIN 28 337 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02559 Bva-Chr4 22959334 22963212 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02559 - - gmx:100811851 525.783
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02559 04 22959334 22963212 Bva03g01155 03 11167696 11173987 ECH
Bva04g02559 04 22959334 22963212 Bva04g02559 04 22959334 22963212 ECH
Bva04g02559 04 22959334 22963212 Bva07g02368 07 19290729 19295734 ECH