Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02467 ATGCTTGGCTTCATTCCATGGCTCTTCGGTCATTCTGTGACTGAGTTTCAATTCAAAGCTCTCGTTGTTCTTTTCCTACAAACTATTTGTGTGTCGAGTTCAAGTAATGAAGGACTCCTAAGGGGATTTTCAGCTGTTCCAGATTCTTCAGTGACGTCGTTTCAGGCTTTTCTCAGTGACCACACCGGCAACTTCTCTCTTGGTTTCCTCCGTGTGGACCGAACTCAATTAGCTCTCGCTGTCCTTCACGTGCCGTCCTCCCAACCATTCTGGCTTGCCAACCCAACTCGCTTGGCTCGCTGGTCTGATTCTACCCGACTCTCGTTTAATGGCAGTCTCGTGATTTCGGATCCTCACGAAGGTGTGCTATGGTCAACTGGCACCACCGGCGACAGTGTTTTGCTCCTCAACACCTCAAACTTGCAAGTGCAATCAGACGGCGATCCACCCTCGGTACTCTGgcaaagttttgattttcccACCGACTCCCTCGTTGAGAATCAAAATTTCACATCAAGCATGTCCCTGGTTTCATCCAACGGCTTGTATTCGTTGCGTTTAGGTGATGACTTCATGGGCTTATATGCAAACTTTCTGCATTCGGATTCCGATTCGGAGCAGGTGATATATTGGAAGCACAAAGCACTAGAAGTTAAAGCCCAAATCGTGGAAGGTGGGGGACCACTTTACGCCCTAGTGAACACCGACGGGTATCTGGGTATGTATCAGTACCAAACCAGTAGCAAACCCATGGATGTGCAGAAGTTCGATAGCTTTCAACGCTCCAACATTTCATTTCTAATGGTACGAATTGAACCGGACGGGAATTTGAATGGGTATTACTGGGATGGGTCAAAGTGGGCGTTGAACTATCAGGCCATAGCTGAAACCTGCGAGCTCCTTAGTCCATGCGGTTCGTACGGTTTGTGCAAGCCGGGCGGGTCTGGATCGGGATGCTCCTGTTTGGACAACAGGACCAGTTATCAATCGGGTACGGGGTGTTTTGATGAGCGACAGCAAGGGTACGGAGATTTTTGTGGCCAAGCAGTGGCTGAAAACAACTACTGGGTTCTGAGGAGGAAAGGAGTGGAGGCACCGGATAAAGAGTTCTTAAGCTACGAAACGTTGTCGTCTGTGGAGCAGTGCGAGAGCTTATGCGAGAAGAACTGCAGCTGTTGGGGTGCGCTGTACAACAATGCCAACGGGTTTTGCTACAGTGTGGATTACCCGATTCAGACGATGTCGGGTACAGGGGATGAGTCCAAAGTGGGTTTTTTTAAAGTAAGGAATAGCCCACCGGGGAAGAAGAAGCGCAGTATTGGAGTGGTGGTAGGCGTTGTGGTTGGGTCTGTGGTTTTAATTGCCATCATCGGAATCGGACTAGCAATTGCAGGGTACTTGAGATGGAAGACTAAAGGGGCGATCAGACAGGATGGAATTTCGCTTTCACCCGGCCCGTATAAGAATCTCGGATCTTCCAGTTTTAGTTATGCTGAATCGAAATG 1505 0.485 MLGFIPWLFGHSVTEFQFKALVVLFLQTICVSSSSNEGLLRGFSAVPDSSVTSFQAFLSDHTGNFSLGFLRVDRTQLALAVLHVPSSQPFWLANPTRLARWSDSTRLSFNGSLVISDPHEGVLWSTGTTGDSVLLLNTSNLQVQSDGDPPSVLWQSFDFPTDSLVENQNFTSSMSLVSSNGLYSLRLGDDFMGLYANFLHSDSDSEQVIYWKHKALEVKAQIVEGGGPLYALVNTDGYLGMYQYQTSSKPMDVQKFDSFQRSNISFLMVRIEPDGNLNGYYWDGSKWALNYQAIAETCELLSPCGSYGLCKPGGSGSGCSCLDNRTSYQSGTGCFDERQQGYGDFCGQAVAENNYWVLRRKGVEAPDKEFLSYETLSSVEQCESLCEKNCSCWGALYNNANGFCYSVDYPIQTMSGTGDESKVGFFKVRNSPPGKKKRSIGVVVGVVVGSVVLIAIIGIGLAIAGYLRWKTKGAIRQDGISLSPGPYKNLGSSSFSYAESK 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02467 501 Pfam S-locus glycoprotein domain 256 323 IPR000858 GO:0048544
Bva04g02467 501 PANTHER OS11G0149900 PROTEIN 51 493 - -
Bva04g02467 501 SUPERFAMILY alpha-D-mannose-specific plant lectins 90 186 IPR036426 -
Bva04g02467 501 PANTHER - 51 493 - -
Bva04g02467 501 PIRSF SLG 8 444 IPR035446 -
Bva04g02467 501 Gene3D - 55 213 - -
Bva04g02467 501 SMART blect_4 48 160 IPR001480 -
Bva04g02467 501 Pfam D-mannose binding lectin 91 175 IPR001480 -
Bva04g02467 501 ProSiteProfiles PAN/Apple domain profile. 346 430 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02467 Bva-Chr4 22484364 22486110 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02467 - - jre:108984774 545.814
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02467 04 22484364 22486110 Bva04g02467 04 22484364 22486110 ECH