Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02456 ATGGTTTATTCTATCTCTGGTGTACGATTTCCTCCTGTTCCTTCAGTTTATAAGTCTTCACAATCGAGCTTTCATGGCGAGCGTAGGAGTACAACTCTCTCATATTTTCTGAAGAAGAACACATTCTCTCGGAAGACCCTTGCTAAAAAAGTTTCCCACGATTCAAACTCTGTATCTTCCGTGGTTGCTAATTCTGATAAAGTACTTGTTCCTGGAGAGCAAGACAATGCTTCATCCTTAACAGATCAACTTGAGACTCCTGAAGTAACCTTAGAGGAAACACAGGATCTAACCATGAAAAGTGAGAATACATTCGAGGATGATGAAGCAGCTAGTGGTTCCACGGAGGACAAGGATGGGCAAGATTCTGTTCTGTCATCACTTGTAGAAGATAAAAGCAAAGTGCAAGCTGAGAAGGCATCAGTTTCTGTAGGTAGGaaagtgaaaatagaaagagatgAAGTTAAGCCTAAGACCATTCCGCCCCCAGGCTCTGggcaaaaaatatatgaaatagatCCACTTTTGCTGGGTCACCGTGAGCATCTTGATTTCCGTTATGGCCAGTACAAAAGATTGCGGGAGGAAATTGACAAGTGCGAAGGTGGATTGGATGCATTTTCCCGTGGTTATGAAAAATTTGGGTTCATGCGCAGGGCCACAGGCATTACTTATAGAGAGTGGGCACCTGGAGCTACGTCAGCGGCATTGATTGGAGACTTCAATAATTGGAATCCAAATGCAGATATAATGACTCGGAATGAGTTTGGCGTGTGGGAGATCTTCTTGCCAAACAATGTGGATGGGTCACCGCCAATTCCTCATGGTTCTCGGGTGAAGaTCCGCATGGAAACACCATCTGGCGTCAAGGATTCAATTCCTGCTTGGATCAAGTACTCTGTACAGGCTCCGGGTGAAATTCCCTATGATGGTATATATTATGATCCACCAGAAGAGgaAAAGTATATCTTCAAATATCCACTGCCAAAGAGACCAAAATCACTTAGAATATATGAGTCACACGTTGGAATGAGTAGTCCTGAGCCATTGATCAATACATATGCTAATTTTAGAGATTATGTGCTGCCTCGCATTAAAAGGCTTGGCTATAATGCTGTCCAGATTATGGCTATCCAAGAACATTCTTATTATGCTAGTTTTGGGTACCATGTTACAAATTTCTTTGCACCTAGCAGCCGGTTTGGAACTCCTGATGAACTTAAGTCACTGATTGATAGAGCCCATGAACTAGGTTTGCTTGTTCTGATGGATATCGTACATAGCCATGCATCAAATAATACGTTGGATGGGCTGAACATGTTTGACGGAACAGACGGTCATTACTTCCATCCTGGGTCGAGGGGTTATCACTGGATGTGGGATTCTCGCCTTTTTAACTATGGAAGCTGGGAAGTACTAAGATTTTTGCTCTCAAATGCAAGATGGTGGCTGGAAGAATTTAAGTTCGATGGGTTTCGTTTTGATGGTGTCACATCGATGATGTACACTCATCATGGTTTGGAGGTTGGTTTTACAGGAAACTAcaatgaatattttggatTTGCAACTGATGTTGATGCTGTGGTTTACCTGATGCTGGTTAATGATGTCATTCATGGGCTCTACCCTGAGGCTGTTACAATTGGTGAAGATGTGAGTGGAATGCCAACATTCTGCCTTCCTACACAAGATGGTGGGGTTGGCTTTGATTATCGCCTGCATATGGCCATTGCAGACAAGTGGATTGAGATTCTCAAGAAGAGAGATGAAGACTGGAGAATGGGTGATATAGTTCATACACTCACAAACAGAAGATGGCTGGAAAAATGCGTAGCTTATGCCGAAAGTCATGACCAAGCCTTGGTTGGTGACAAGACAATAGCATTTTGGTTGATGGACAAGGATATGTATGACTTCATGGCTTTAGACAGACCAGCTACTCCTCTTATTGATCGTGGTATAGCGTTGCATAAGATGATTAGGCTTGTCACCATGGGGCTTGGTGGCGAAGGGTATTTGAACTTCATGGGGAATGAATTTGGCCATCCTGAGTGGATTGATTTTCCAAGGGGTGATCAACATCTTCCTAATGGCTCCGTAATTCCTGGGAATAATAACAGTTTTGATAAATGTAGGCGTAGATTTGACTTGGGAGATGCAGAATATTTAAGATATCGTTGGATGCAAGAATTTGATCAAGCCATGCAGCatgtagaagaaaaatatggtTTCATGACTTCTGATCACCAATATACATCACGAAAAGATGAAGGTGACAGGATTATAGTCTTTGAAAGGGGCAACCTCGTCTTCGTCTTCAACTTTCATTGGTGTAACAGCTATTCAGATTACCGAGTTGGCTGCTTAAAGCCAGGGAAGTACAAGatTGTCTTGGATTCAGATGACCCATTGTTTGGAGGATTCAATAGGCTTGATCATACTGCCGAGTACTTCACCAATGAGGGATGGTATAACGACCGGCCTAGGTCCTTTCTAGTGTACTCACCTTCCAGAACAGCAGTGGTGTATGCTCTTGTAGATGATGAAGCTGAGCCACAGCCAGCCAAACCGTG 2573 0.4201 MVYSISGVRFPPVPSVYKSSQSSFHGERRSTTLSYFLKKNTFSRKTLAKKVSHDSNSVSSVVANSDKVLVPGEQDNASSLTDQLETPEVTLEETQDLTMKSENTFEDDEAASGSTEDKDGQDSVLSSLVEDKSKVQAEKASVSVGRKVKIERDEVKPKTIPPPGSGQKIYEIDPLLLGHREHLDFRYGQYKRLREEIDKCEGGLDAFSRGYEKFGFMRRATGITYREWAPGATSAALIGDFNNWNPNADIMTRNEFGVWEIFLPNNVDGSPPIPHGSRVKIRMETPSGVKDSIPAWIKYSVQAPGEIPYDGIYYDPPEEEKYIFKYPLPKRPKSLRIYESHVGMSSPEPLINTYANFRDYVLPRIKRLGYNAVQIMAIQEHSYYASFGYHVTNFFAPSSRFGTPDELKSLIDRAHELGLLVLMDIVHSHASNNTLDGLNMFDGTDGHYFHPGSRGYHWMWDSRLFNYGSWEVLRFLLSNARWWLEEFKFDGFRFDGVTSMMYTHHGLEVGFTGNYNEYFGFATDVDAVVYLMLVNDVIHGLYPEAVTIGEDVSGMPTFCLPTQDGGVGFDYRLHMAIADKWIEILKKRDEDWRMGDIVHTLTNRRWLEKCVAYAESHDQALVGDKTIAFWLMDKDMYDFMALDRPATPLIDRGIALHKMIRLVTMGLGGEGYLNFMGNEFGHPEWIDFPRGDQHLPNGSVIPGNNNSFDKCRRRFDLGDAEYLRYRWMQEFDQAMQHVEEKYGFMTSDHQYTSRKDEGDRIIVFERGNLVFVFNFHWCNSYSDYRVGCLKPGKYKIVLDSDDPLFGGFNRLDHTAEYFTNEGWYNDRPRSFLVYSPSRTAVVYALVDDEAEPQPAKP 857
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02456 857 MobiDBLite consensus disorder prediction 66 130 - -
Bva04g02456 857 Gene3D Immunoglobulins 209 321 IPR013783 -
Bva04g02456 857 Gene3D - 747 853 IPR013780 -
Bva04g02456 857 CDD E_set_GBE_euk_N 221 314 - -
Bva04g02456 857 Pfam Alpha amylase, C-terminal all-beta domain 751 845 IPR006048 GO:0003824|GO:0005975|GO:0043169
Bva04g02456 857 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 2-1, CHLOROPLASTIC/AMYLOPLASTIC 8 852 - -
Bva04g02456 857 SMART aamy 352 712 IPR006047 GO:0005975
Bva04g02456 857 CDD AmyAc_bac_euk_BE 318 733 - -
Bva04g02456 857 Pfam Alpha amylase, catalytic domain 364 433 IPR006047 GO:0005975
Bva04g02456 857 PANTHER 1,4-ALPHA-GLUCAN-BRANCHING ENZYME 8 852 IPR037439 GO:0003844|GO:0005978
Bva04g02456 857 SUPERFAMILY E set domains 207 316 IPR014756 -
Bva04g02456 857 Gene3D Glycosidases 173 742 - -
Bva04g02456 857 SUPERFAMILY Glycosyl hydrolase domain 747 847 - -
Bva04g02456 857 Pfam Carbohydrate-binding module 48 (Isoamylase N-terminal domain) 213 296 IPR004193 GO:0004553|GO:0005975
Bva04g02456 857 SUPERFAMILY (Trans)glycosidases 337 723 IPR017853 -
Bva04g02456 857 PIRSF GlgB 50 855 IPR037439 GO:0003844|GO:0005978
Bva04g02456 857 MobiDBLite consensus disorder prediction 71 98 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02456 Bva-Chr4 22413069 22425492 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02456 30 847 Glycoside Hydrolase AT5G03650 75.672 0.0 1299
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02456 K00700 - gmx:100816963 1524.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02456 04 22413069 22425492 Bva04g02456 04 22413069 22425492 ECH