Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02436 ATGTTGATAGACGGGCGAGCGGGGAGGCTGAGTCTGATCAGCCTATTGCTCGCAGTAAGTATTGGATTATTGAGCGACGTCGTTTGTTCCTACGTCCGGCCACCGCCTCGTGAAATAATCTTCGTCAAACAGTCCGGTGATGCTGATTCTGACACCACACCACAACAGGTGCACATATCTCAGGTGGGCCAAGACAAAATGAGGATATCATGGATCACAGAGAGCCCAACTCCTGCAAAACTAGAATACGGTACATCTCCTGGGGCATATAGATTCTCTGCCACAGGGACTACCTCTTCCTACCGTTATCTCATGTATAACTCAGGTGAAATTCATGACGTGGATATCGGTCCACTCAACCCTAACACACACTACTACTACCGCTTGGGTGATTCAGCCAAACAATACAATTTCAAAACTCCACCTTCTCGACTCCCCGTCAAATTGGCCGTTGCAGGGGATCTCGGGCAAACAGAATGGACAAGGTCGACTCTGCAGCACATTGGTGACTCAAATTATGACATGCTGCTGTTACCGGGCGACCTGTCCTATGCAGATGATGTACAGTCTCTCTGGGACTCGTTTGGTCGTCTGGTCGAGCCATTAGCAAGCCAGCGTCCTTGGATGGTCACCCAAGGCAACCACGAGGTGGAGAAGATTCCCCTCTTCCACCGCAAACCATTCACCGCCTACAATGCCAGGTGGCGAATGCCCTTCGAGGAAAGCGGCTCAGATTCTAATCTGTACTATTCTTTTGACGTGGCTACTGTCCATGTTATAATGCTGGGATCATACGCAGACTTTGCTCCTCATTCTGCACAGTACAAATGGCTCGAGGGTGACTTGAACAAGGTGGATAGGGAAAAGACTCCTTGGATCCTGGTTCTGATTCATGCGCCGTGGTACAACTCCAACACTGCTCATCAGGGTGAGATTCAATCAATTGCCATGAAGGCAGCCATGGAAGACTTGCTCTATCGAGCTCGAGTTGATCTTGTTTTTGCAGGACATGTTCATGCCTACGAGCGCTTTacGCGGGTTTATAAAGACAAAGCTGACAGTTGTGGTCCGGTGCATGTCACAATTGGGGATGGTGGAAACAGAGAAGGCCTTGCTACCAGGTACATAGATCCCAAACCAgagatatcgatgttcagggaGGCTAGCTTTGGGCATGGGATATTAGAGGTGGTGAATGCAACGCATGCATTGTGGACGTGGCATAGGAACGATGACAACGAGCCTGTTGCTACTGATTCTGTCTGGCTCACAAGCTCCTCCTCCTTCCCTGCTTGTAAACTTTA 1304 0.4877 MLIDGRAGRLSLISLLLAVSIGLLSDVVCSYVRPPPREIIFVKQSGDADSDTTPQQVHISQVGQDKMRISWITESPTPAKLEYGTSPGAYRFSATGTTSSYRYLMYNSGEIHDVDIGPLNPNTHYYYRLGDSAKQYNFKTPPSRLPVKLAVAGDLGQTEWTRSTLQHIGDSNYDMLLLPGDLSYADDVQSLWDSFGRLVEPLASQRPWMVTQGNHEVEKIPLFHRKPFTAYNARWRMPFEESGSDSNLYYSFDVATVHVIMLGSYADFAPHSAQYKWLEGDLNKVDREKTPWILVLIHAPWYNSNTAHQGEIQSIAMKAAMEDLLYRARVDLVFAGHVHAYERFTRVYKDKADSCGPVHVTIGDGGNREGLATRYIDPKPEISMFREASFGHGILEVVNATHALWTWHRNDDNEPVATDSVWLTSSSSFPACKL 434
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02436 434 Pfam Purple acid Phosphatase, N-terminal domain 54 140 IPR015914 GO:0003993|GO:0046872
Bva04g02436 434 PANTHER PURPLE ACID PHOSPHATASE 16 432 - -
Bva04g02436 434 Gene3D - 144 432 IPR029052 -
Bva04g02436 434 Pfam Calcineurin-like phosphoesterase 148 341 IPR004843 GO:0016787
Bva04g02436 434 SUPERFAMILY Purple acid phosphatase, N-terminal domain 50 142 IPR008963 GO:0003993|GO:0046872
Bva04g02436 434 Gene3D - 53 143 - -
Bva04g02436 434 CDD MPP_PAPs 146 425 IPR041792 -
Bva04g02436 434 Pfam Iron/zinc purple acid phosphatase-like protein C 356 414 IPR025733 -
Bva04g02436 434 SUPERFAMILY Metallo-dependent phosphatases 146 415 IPR029052 -
Bva04g02436 434 PANTHER ACID PHOSPHATASE RELATED 16 432 IPR039331 GO:0003993
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02436 Bva-Chr4 22310495 22314217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02436 54 414 Miscellaneous Gene Families AT1G13900 28.046 8.46e-34 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02436 K22390 - cpap:110817060 657.136
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02436 04 22310495 22314217 Bva04g02436 04 22310495 22314217 ECH