Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02424 ATGGAAAACCTTCCGGTTGAAGTGATCGGGAACATATTATCCCAAGTTGGGTCTGCCCGGGATGTTGTGATTGCATCAGCAACTTGCAAGAAATGGAGAGAAGCTTGGCGTAATCATCTTCACACTCTTTCGTTCAATTCTTGTGACTGGCCTTTCTATCTTGAATTATCCCCTAGTAAATTGGAAATACTAATCACACAAACAATTTTTCAAACCAAAGCACTGCAGAGCCTAACGATTTTCATGGATGTTGATGAGTTTTCTGCTGCCCCGGTCATTGCTTGGCTTATGTACACTAGAGATTCCTTGCGTCAATTGCGTTATAATGTGAGGACAACCCCAACTTTCAATATCCTTGATAAATGCGGTAGGCAGAAACTGGAAGAGTTGGTATTGGCTCATAATTCTATTGCAGGTGTTGATCCCATTTATCAGAAATTTCCTTGCTTGAAGTCACTTTCACTGAGTCATGTTAGCATCTCAGAATTGGATCTGAGCCTTCTACTTTCTGTTTGTCCTAAACTTAAAACCTTGTCCATTATTAGTCCGGAGATTGCCATGTCCGATTCTCAGGCTTCCGTGGAGCTCAGCAGCTCTTACTTGAAGGATTTCTATGTTGAATCATTTAGTTcggaaaaatttatattagagGCAGACTCGCTTGAGAATCTCCATCTGAAAGATTGCACCtttgaagattttgaattaattggcAAGGGAACGTTGAAAGTTCTGAAGATTGATGATGTGAGTGTCATTCGTCTTGATATTGGTGAGAATACAGAGAATCTTGAGATTGTAGATGTCAATAGCTTCACAATTGTGTGGCCAAAATTTTTTCAGATGATCtcaaaagcttcaaagttatacAGGTTTCGGCTGTGGGGTGTCGTGTTCGATGATGAGGATGAGGGTGTGGATTTAGGGGCAATTTCTGCTTGTTTTCCTCAACTGGTGCATCTGTCCTTAAGTTATGATTTGAGGGATGGAGTCCTTCATTATGGCTTGGAGAGTTCTCCTTTGGTGAACGTGGTTGTGTTAGAACTTGGATGGACAACAATCAATGATCTCTTCTCAGCATGGGTAGCTGGACTTTTGGAAAGATGCcccaatttgaaaaaattggtCATTCATGGTGTTGTTTCAGATATCAAAAGCCATGAAGAGTGTCAAATTTTTGCTAGATTTACTGAATTCGTTCTTCAATtaggaagaaaatatatgcatgtaaAGATTGAGTTTGAATATGTGTA 1253 0.3743 MENLPVEVIGNILSQVGSARDVVIASATCKKWREAWRNHLHTLSFNSCDWPFYLELSPSKLEILITQTIFQTKALQSLTIFMDVDEFSAAPVIAWLMYTRDSLRQLRYNVRTTPTFNILDKCGRQKLEELVLAHNSIAGVDPIYQKFPCLKSLSLSHVSISELDLSLLLSVCPKLKTLSIISPEIAMSDSQASVELSSSYLKDFYVESFSSEKFILEADSLENLHLKDCTFEDFELIGKGTLKVLKIDDVSVIRLDIGENTENLEIVDVNSFTIVWPKFFQMISKASKLYRFRLWGVVFDDEDEGVDLGAISACFPQLVHLSLSYDLRDGVLHYGLESSPLVNVVVLELGWTTINDLFSAWVAGLLERCPNLKKLVIHGVVSDIKSHEECQIFARFTEFVLQLGRKYMHVKIEFEYV 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02424 417 SUPERFAMILY RNI-like 112 380 - -
Bva04g02424 417 PANTHER F-BOX PROTEIN-LIKE 1 415 - -
Bva04g02424 417 Pfam F-box-like 2 37 IPR001810 GO:0005515
Bva04g02424 417 PANTHER F-BOX/LRR-REPEAT PROTEIN 1 415 - -
Bva04g02424 417 SUPERFAMILY F-box domain 2 52 IPR036047 GO:0005515
Bva04g02424 417 SMART fbox_2 4 45 IPR001810 GO:0005515
Bva04g02424 417 Gene3D Ribonuclease Inhibitor 24 395 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02424 Bva-Chr4 22266337 22268557 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02424 - - gmx:100792331 640.573
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02424 04 22266337 22268557 Bva04g02424 04 22266337 22268557 ECH