Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02409 ATGTCGGGAAAGAGAAGGAGGAAGTTGAAATCGTTAACGGATGCAATCACAGACAATAGAAGAGTAGCAACTGAGCTGAAAAATCAAACGGTGGAGCTGCTAACCTGGTCTGATCTTCCTGCTGAACTCTTAGAATTGATTTTGTCCCGCTTGACCCTAGAGGATAATGTTCGAGCTTCTGTTGTTTGCAAGAGATGGAATTATGTTGCCAATGCCGTACGGGTAGTAAACCAATCACCATGGCTTATGTATTTTCCAAAGTTTGGTAACTGGTATGAATTCTATGACCCCATGCAGCGGAAGACCTATTCTCTTGAGTTACCAGAGTTAAGTGGCTCTAGAGTTTGTTATACAAAAGATGGCTGGTTACTACTATACCGTTCCAGATCTCACcgagttttcttctttaatccCTTTACTAGAGAAGTCATCAAACTGCCAAGATTTGAGATGACATATCAGATAGTTGCCTTCTCTTGTGCTCCAACATCTCCTGGCTGTGTTTTGTTTACTGTTAAGCATGTTAGTCCCACAATTGTGGCTATTAGTACATGTCATCCGGGGGCAACAGAATGGACTACTGTGAATTACCAAAACCGCTTACCCTTTGTCAGTAGTATATGGAATAAACTTGTCTTTTGCAATGGcctcttttattgtttaagtCTCACAGGTTGGCTAGGGGTATTTGACCCAATTGGACGTACGTGGAGTGTTCTGGCTGTAACTCCTCCCAAATGCCCTGAGAACTTTTTTGCCAAAAACTGGTGGAAGGGTAAATTTATGACAGAGCATGCAGGGGATATATTGGTAATTTACACCTGTTCGAGTGATAACcccattatttttaagttaaaccAGACAAATATGGAATGGGGAGAGATGAGAACGCTTGATGGAGTTACTCTTTTTGCAAGTTTCTTGTCATCTCATTCAAGAACTGACCTCCCTGGAATAATGAGAAACAATGTCTACTTCTCTAAAGTTCGCTTTTATGGAAAGCGTTGCATATCGTTCTCACTTGATGATTGTAGATACTATCCTCGTAAGCAGTGCCATGACTGGGGTGAACAAGACCCTTTTGAAACCATTTGGATTGATCCACCAAAGGACTTCTCAAACTTAATGTG 1130 0.3965 MSGKRRRKLKSLTDAITDNRRVATELKNQTVELLTWSDLPAELLELILSRLTLEDNVRASVVCKRWNYVANAVRVVNQSPWLMYFPKFGNWYEFYDPMQRKTYSLELPELSGSRVCYTKDGWLLLYRSRSHRVFFFNPFTREVIKLPRFEMTYQIVAFSCAPTSPGCVLFTVKHVSPTIVAISTCHPGATEWTTVNYQNRLPFVSSIWNKLVFCNGLFYCLSLTGWLGVFDPIGRTWSVLAVTPPKCPENFFAKNWWKGKFMTEHAGDILVIYTCSSDNPIIFKLNQTNMEWGEMRTLDGVTLFASFLSSHSRTDLPGIMRNNVYFSKVRFYGKRCISFSLDDCRYYPRKQCHDWGEQDPFETIWIDPPKDFSNLM 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02409 376 Pfam F-box-like 36 71 IPR001810 GO:0005515
Bva04g02409 376 Gene3D - 35 74 - -
Bva04g02409 376 PANTHER OS09G0392200 PROTEIN 5 372 IPR044619 -
Bva04g02409 376 SUPERFAMILY F-box domain 25 95 IPR036047 GO:0005515
Bva04g02409 376 PANTHER OS09G0392200 PROTEIN 5 372 - -
Bva04g02409 376 SMART fbox_2 39 79 IPR001810 GO:0005515
Bva04g02409 376 ProSiteProfiles F-box domain profile. 33 84 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02409 Bva-Chr4 22205131 22207229 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02409 - - gmx:100796538 674.085
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02409 04 22205131 22207229 Bva04g02409 04 22205131 22207229 ECH