LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva04g02405	ATGACCGAAGTACTCCAATCCCCATCTCACTTCCCTTCGCCTTCAAGCTCTTCCAGTCCATGTGGGCGTCTCACATCCAATGATGTTTCACACCCAAGTGCCTTTATTAACAGTCCTTCAGTGGAGGAAGGGGTCCAGGATCATTTGGGTTCAGACTCAGAGGAGGTCCAAGAAGAGGAAGCTCAAGTACGAGataggaaaaggaaagaaagggaCAGAGAGGGAGATCAGCTCTCTCTTTTGACATTTTTGGTTGCTGCTTTTAGGAAATCTATAATTGGGTGCAGTACTGCCAGAGGAGAGCTCTCTTCCATGGAGATTGGCTGGCCTTCCAATGTCAGGCATGTTGCCCATGTTACTTTTGACCGCTTTAATGGTTTTCTTGGCTTGCCTGTCGAGTTCGAACCTGAAGTTCCCAGGAGGGCTCCTAGCGCCAGTGCAAATGTTTTTGGTGTTTCAACGGAATCTATGCAGCTCTCTTTCGATGCCAGAGGAAATAGTGTGCCTACAATACTCCTCTTGATGCAAAGGCATTTGTATGCACAAGGAGGCCTGCAGGCTGAAGGAATCTTTAGAATTAATGCTGAGAATAGTCAAGAGGAGTATGTTAGAGAACAATTAAATAGAGGTGTAATACCAGGTGGCATTGACGTGCACTGCTTGGCAGGTCTAATAAAGGCTTGGTTCAGAGAACTTCCAACTGGGGTTTTGGACCCTCTTTCACACGAGCAGGTGATGCAATCTCAGTCAGAAGAGGAATGTGCTCAGCTCGTGAGGCTTCTTCCTCCAACAGAAGGCGCTTTGCTAGACTGGGCTATAAACCTAATGGCCGATGTTGCTCAAATGGAACATCTAAATAAGATGAATGCACGTAATATTGCAATGGTTTTTGCACCAAACATGACTCATATGGTAGATCCTTTGACTGCTTTGATGTATGCGGTACAAGTGATGAATTTTCTCAAGACTCTTGTTGTAAAGACgctgagagaaagagaagaatctATTATAGGATTAAATCCTGTTTCAGACCTAAATTCTTTTGATGACGATGGGCACCACAGCTCTTCGCAACTGATTCCCAAGGATGACAgtgaaaatcaaaatgataGGAGAGAAGAGGAGAAAGTTTTTGTTGCTGAAGAACCCTCATTACAAAGTCCCAGTCACCATACCGAAGATGGCTCTGAGGGTGGATCCAAAGATTTGGTATCTCCCACTGAAGCTATCATTCCAGGAGGCAATAGATTGCTGGTTGACAGTTGTCCTTGCATTGTTGTCTCTCAAGTTCGCTCCTTGTCAAGTGGACTTCAAGAGGGTAGTTTTATTGCTGGTCTTCCTAAGGGGGATCAAGTAAATATTTGCAAGAGCAAAAAGGTGATTGAACTGCAAGTTGCAGGAGCTACAGATCAGAAGAACCGGGGAACTGCAATTATTAGCCGCATAAATTCTAGGACAGAATTAGCTGAAGCTTGGCGTTG	1481	0.4328	MTEVLQSPSHFPSPSSSSSPCGRLTSNDVSHPSAFINSPSVEEGVQDHLGSDSEEVQEEEAQVRDRKRKERDREGDQLSLLTFLVAAFRKSIIGCSTARGELSSMEIGWPSNVRHVAHVTFDRFNGFLGLPVEFEPEVPRRAPSASANVFGVSTESMQLSFDARGNSVPTILLLMQRHLYAQGGLQAEGIFRINAENSQEEYVREQLNRGVIPGGIDVHCLAGLIKAWFRELPTGVLDPLSHEQVMQSQSEEECAQLVRLLPPTEGALLDWAINLMADVAQMEHLNKMNARNIAMVFAPNMTHMVDPLTALMYAVQVMNFLKTLVVKTLREREESIIGLNPVSDLNSFDDDGHHSSSQLIPKDDSENQNDRREEEKVFVAEEPSLQSPSHHTEDGSEGGSKDLVSPTEAIIPGGNRLLVDSCPCIVVSQVRSLSSGLQEGSFIAGLPKGDQVNICKSKKVIELQVAGATDQKNRGTAIISRINSRTELAEAWR	493

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva04g02405	493	Coils	Coil	53	73	-	-
	Bva04g02405	493	MobiDBLite	consensus disorder prediction	1	40	-	-
	Bva04g02405	493	MobiDBLite	consensus disorder prediction	1	72	-	-
	Bva04g02405	493	SMART	PBD_5	107	141	IPR000095	-
	Bva04g02405	493	MobiDBLite	consensus disorder prediction	47	72	-	-
	Bva04g02405	493	CDD	RhoGAP	169	324	-	-
	Bva04g02405	493	MobiDBLite	consensus disorder prediction	348	380	-	-
	Bva04g02405	493	PANTHER	MKIAA1688 PROTEIN	1	493	IPR044785	GO:0005096
	Bva04g02405	493	ProSiteProfiles	Rho GTPase-activating proteins domain profile.	152	337	IPR000198	GO:0007165
	Bva04g02405	493	MobiDBLite	consensus disorder prediction	348	404	-	-
	Bva04g02405	493	ProSiteProfiles	CRIB domain profile.	107	120	IPR000095	-
	Bva04g02405	493	SUPERFAMILY	GTPase activation domain, GAP	147	325	IPR008936	GO:0007165
	Bva04g02405	493	Pfam	P21-Rho-binding domain	106	133	IPR000095	-
	Bva04g02405	493	Gene3D	CRIB domain	100	136	IPR036936	-
	Bva04g02405	493	CDD	CRIB	105	145	-	-
	Bva04g02405	493	SMART	RhoGAP_3	166	329	IPR000198	GO:0007165
	Bva04g02405	493	PANTHER	RHO GTPASE-ACTIVATING PROTEIN 1	1	493	-	-
	Bva04g02405	493	Pfam	RhoGAP domain	169	303	IPR000198	GO:0007165
	Bva04g02405	493	Gene3D	Rho GTPase activation protein	139	337	IPR008936	GO:0007165

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva04g02405	Bva-Chr4	22186088	22189947	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva04g02405	-		-	gmx:100783118	687.567

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva04g02405	04	22186088	22189947	Bva04g02405	04	22186088	22189947	ECH