Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02404 ATGAGCAGGTCAGGGCAGCCTCCGGATCTGAAGAAGTACATGGACaaaaagcttcaaaTCAAACTGAATGCGAATCGGATGATCATTGGCACTCTCCGTGGGTTTGACCAGTTTATGAACCTGGTTGTTGACAATACAGTGGACGTTAATGGCGATGAGAAAAATGATATAGGGATGGTGGTGATCAGAGGAAATAGTGTTGTCACTGTTGAGGCACTTGAACCTGTGAACAGGACATA 239 0.4351 MSRSGQPPDLKKYMDKKLQIKLNANRMIIGTLRGFDQFMNLVVDNTVDVNGDEKNDIGMVVIRGNSVVTVEALEPVNRT 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02404 79 Gene3D - 1 76 - -
Bva04g02404 79 SMART Sm3 8 72 IPR001163 -
Bva04g02404 79 PIRSF Lsm7 5 78 - -
Bva04g02404 79 CDD Sm_G 6 74 IPR034098 GO:0000387|GO:0005681
Bva04g02404 79 Pfam LSM domain 9 71 IPR001163 -
Bva04g02404 79 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN G 1 79 - -
Bva04g02404 79 PANTHER SMALL NUCLEAR RIBONUCLEOPROTEIN 1 79 IPR044641 -
Bva04g02404 79 SUPERFAMILY Sm-like ribonucleoproteins 9 76 IPR010920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02404 Bva-Chr4 22182490 22183477 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02404 K11099 - gmx:100305530 154.451
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02404 04 22182490 22183477 Bva04g02404 04 22182490 22183477 ECH