Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02401 ATGGTGTCCAAATTGGTGTATTGGACAAATGAATCACATGCAGATCCAAATGCACCCATGTTCTATATGGGAATCTACCATCTATTTTACCAGTACAACCCCAAAGGGGCAGTGTGGGGCAACATTGTGTGGGCCCACTCAGTATCAACCGACCTCATCAATTGGAAACATCTTGAACCTGCCATTTCCCCATCCAAGCCATTTGACAAATACGGGTGTTGGTCCGGGTCAGCCACCGTCCTTCCGGGTAAAGGTCCTGTAATCCTCTACACTGGAGTTGCTGACGAGAACAGTACCCAGGTCCAATGCCATGCTGAACCCAAGAATCTCTCCGACCCATATCTTCGAAAATGGGTAAAGCCCAACTCCTTCAACCCGTTTCTGGTTGCACAACAAGGCGTAAACGGCAGTGCATTCCGTGACCCAACAACTGCTTGGTGGAGCAAGGACGGACATTGGAGGATTCTGGTAGGTAGCAGAAGGAAGGACAGAGGAGTAGCTTATTTGTATAGAAGTAGAGATTTTCTCCACTGGGTCAAGTCCAAGCACCCGATCCATTCTTCATCCAGAACGGGTATGTGGGAGTGCCCCGATTTTTACCCGGTTTCATTGAATGGGAAAGAAGGGTTGGACATATCCGAGACCGGGAATAGGGTTAAGCATGTGCTCAAGAATAGCCTCGACAGGACCAGGTTTGATTACTATACTCTTGGTAAATATATCCCGGATAAGGATAGGTATGTCCCGGATAACAGCTCAGAAGATGGTTGGGGTGGGCTTAGATACGATTATGGTAACTTCTACGCTTCCAAGTCATTCTTTGACCCCAAAAAGAACAGAAGAATCATATGGGGTTGGGCAAATGAATCTGATTCCAAGGAAGACGACAATACCAAAGGATGGGCAGGAATACAGGCAATTCCAAGATCTGTTTGGCTTGACTCCCGTGGAAAACAATTAGCACAATGGCCTGTTGAAGAGTTAAATACTCTGAGAGGGAAACAAGTTAAAATGACCAATCAAAAGCTTCAAAAGGGAGATTACATTGAAGTGAAAGGAATAATTTCTGTCGCGCAGGCTGATGTGGAAGTTAGCTTCTCATTTTCGAGCTTGGCCAAAGCCGAGCCATTTGATCCTAGGTGGGTGAACGCACAGGATCTCTGTGCCCAGAAAGGTTCAAAGCATCAAGGTGGGCTTGGACCATTTGGGATTCTGACATTGGCTTCAAAAAAGCTAGAGGAGTTCACTCCTGTGTTCTTCAGAATTTTCAAAGCTCCAAACAAGCATGTGGTTCTCATGTGCTCTGATGCAAGCAGTTCCTCGTTGAATGTCGACGGACTATACAAGCCATCATTTGCTGGCTTCGTAGATGTTGATTTAGCCGATAAGAAGCTTTCTCTTAGGAGTTTGATTGATCACTCTGTAGTAGAAAGTTTCGGAGCAGGAGGGAGAACATGCATCTTATCTAGGGTTTATCCAACACTAGCAGTGCAGAATCAAGCTCATTTGTTTGTGTTCAACAATGGTACTGAGCCAATCACTGTGGAGAATCTCAACGCATGGAGCATGAAAAGTGCTAAGATAAAATG 1589 0.4556 MVSKLVYWTNESHADPNAPMFYMGIYHLFYQYNPKGAVWGNIVWAHSVSTDLINWKHLEPAISPSKPFDKYGCWSGSATVLPGKGPVILYTGVADENSTQVQCHAEPKNLSDPYLRKWVKPNSFNPFLVAQQGVNGSAFRDPTTAWWSKDGHWRILVGSRRKDRGVAYLYRSRDFLHWVKSKHPIHSSSRTGMWECPDFYPVSLNGKEGLDISETGNRVKHVLKNSLDRTRFDYYTLGKYIPDKDRYVPDNSSEDGWGGLRYDYGNFYASKSFFDPKKNRRIIWGWANESDSKEDDNTKGWAGIQAIPRSVWLDSRGKQLAQWPVEELNTLRGKQVKMTNQKLQKGDYIEVKGIISVAQADVEVSFSFSSLAKAEPFDPRWVNAQDLCAQKGSKHQGGLGPFGILTLASKKLEEFTPVFFRIFKAPNKHVVLMCSDASSSSLNVDGLYKPSFAGFVDVDLADKKLSLRSLIDHSVVESFGAGGRTCILSRVYPTLAVQNQAHLFVFNNGTEPITVENLNAWSMKSAKIK 529
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02401 529 SUPERFAMILY Concanavalin A-like lectins/glucanases 324 526 IPR013320 -
Bva04g02401 529 Gene3D Glycosyl hydrolase domain; family 43 11 337 IPR023296 -
Bva04g02401 529 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE ISOENZYME CWINV1-RELATED 16 529 - -
Bva04g02401 529 Pfam Glycosyl hydrolases family 32 C terminal 327 522 IPR013189 -
Bva04g02401 529 Gene3D - 338 523 - -
Bva04g02401 529 PANTHER BETA-FRUCTOFURANOSIDASE, INSOLUBLE PROTEIN 16 529 - -
Bva04g02401 529 SUPERFAMILY Arabinanase/levansucrase/invertase 13 325 IPR023296 -
Bva04g02401 529 CDD GH32_Fruct1-like 7 313 - -
Bva04g02401 529 SMART glyco_32 5 483 IPR001362 GO:0004553|GO:0005975
Bva04g02401 529 Pfam Glycosyl hydrolases family 32 N-terminal domain 14 324 IPR013148 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02401 Bva-Chr4 22163024 22165135 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02401 14 524 Glycoside Hydrolase AT3G52600 65.583 0.0 692
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02401 K01193 - gmx:100777418 868.996
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02401 04 22163024 22165135 Bva04g02401 04 22163024 22165135 ECH