Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02373 ATGACGCTTGGCTCAGGAGGATCGAGTGTCGTGGTCCCAAGAAACTTCAGATTGCTGGAGGAACTTGAACGGGGAGAAAAAGGTATTGGAGATGGCACAGTTAGCTATGGAATGGATGACGGTGATGACATTTACATGCGCTCCTGGACTGGCACCATAATTGGTCCTCATAATACTGTACATGAAGGAAGAATTTATCAATTGAAGCTATTTTGCGATAAGGATTATCCAGAGAAGCCCCCAAGTGTTCGATTTCATTCACGGATCAATATGACTTGTGTTAATCATGAAACTGGAGTGGTTGAACCAAAGAAATTCGGTCTTCTTGCAAATTGGCAACGAGAGTACACCATGGAGGATATACTGACCCAgctgaaaaaggaaatggcAGCTCCACATAACCGGAAGCTTGTTCAGCCTCCAGAAGGTACCTACTTTTA 440 0.4227 MTLGSGGSSVVVPRNFRLLEELERGEKGIGDGTVSYGMDDGDDIYMRSWTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPSVRFHSRINMTCVNHETGVVEPKKFGLLANWQREYTMEDILTQLKKEMAAPHNRKLVQPPEGTYF 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02373 146 PANTHER - 9 140 - -
Bva04g02373 146 SMART ubc_7 16 144 - -
Bva04g02373 146 ProSiteProfiles Ubiquitin-conjugating (UBC) core domain profile. 13 146 IPR000608 -
Bva04g02373 146 SUPERFAMILY UBC-like 11 146 IPR016135 -
Bva04g02373 146 PANTHER UBIQUITIN-CONJUGATING ENZYME E2 9 140 - -
Bva04g02373 146 Pfam Ubiquitin-conjugating enzyme 43 136 IPR000608 -
Bva04g02373 146 Gene3D Ubiquitin Conjugating Enzyme 4 146 IPR016135 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02373 Bva-Chr4 22016750 22019372 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02373 K10704 - gmx:100816570 305.449
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02373 04 22016750 22019372 Bva04g02373 04 22016750 22019372 ECH