Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02372 ATGCCACCCTCCGAGTTATCGCCGCCACAGCATAGAACAGTAATCACACGATCGGTATGGGCCGCCAATCTGGAATCCGAACTTGAATTGATTCGATCCGCCATTGATTTGTACCCACTCGTCTCCATGGATACCGAATTTCCCGGCGTCGTCGTCCGTCCCGACGCTGGCGATCAGTACTTCCGCCATCGGCAACCTACCTCTCATTATGCTGTTCTTAAAGCCAACGTAGATCGTTTGCAATTGATCCAGATTGGCCTCACACTTTCTGACGACGAGGGCAACCTTCCAAATTTCGGCACCAGTAATTCGTACATTTGGGAGTTCAATTTCAGAGATTTTGATGTTGCCCACGATGTCCACGCCCACGACTCTGTCGAGTTGTTAAGGCGCCAGGGCATCGATTTCGAGAAGAACAGAGAATTTGGGATCGATTCGGTGCGGTTCGCTGCGTTAATGATGTCGTCAGGGCTTGTGTGCAATGACGCTGTGAGCTGGGTGACCTTTCACAGTGCGTATGACTTCGGGTATCTAGTCAAGTTGCTTACTCAGAGGGTTTTGCCGGATGAGTTGGTCTGTTTCCTGCGTCTTGTTAGAGTATTTTTCGGGGATAGGGTTTATGATGTGAAGCACCTGATGAAGTTCTGCTCGAACTTACATGGTGGGTTGGACCGAGTCTGTCAGTCTCTAAACGTGGAACGAGTTACTGGGAAAAGCCATCAGGCCGGTTCAGATAGCCTGCTGACTTTACACGCTTTTCAGAAAATCAGGGAGCTTTACTTTGGGATGGAAGATGAGCTAGTCAAGTACGCAGGCGTCTTGTATGGTTTAGAGGTTTTCTG 842 0.4941 MPPSELSPPQHRTVITRSVWAANLESELELIRSAIDLYPLVSMDTEFPGVVVRPDAGDQYFRHRQPTSHYAVLKANVDRLQLIQIGLTLSDDEGNLPNFGTSNSYIWEFNFRDFDVAHDVHAHDSVELLRRQGIDFEKNREFGIDSVRFAALMMSSGLVCNDAVSWVTFHSAYDFGYLVKLLTQRVLPDELVCFLRLVRVFFGDRVYDVKHLMKFCSNLHGGLDRVCQSLNVERVTGKSHQAGSDSLLTLHAFQKIRELYFGMEDELVKYAGVLYGLEVF 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02372 280 SUPERFAMILY Ribonuclease H-like 17 277 IPR012337 -
Bva04g02372 280 Pfam CAF1 family ribonuclease 19 144 IPR006941 -
Bva04g02372 280 PANTHER CCR4-ASSOCIATED FACTOR 1 HOMOLOG 11-RELATED 8 279 - -
Bva04g02372 280 Gene3D - 4 279 IPR036397 GO:0003676
Bva04g02372 280 PANTHER CCR4-NOT TRANSCRIPTION COMPLEX SUBUNIT 8 279 IPR039637 GO:0004535|GO:0030014
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02372 Bva-Chr4 22013636 22014911 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02372 K12581 - gmx:100790027 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02372 04 22013636 22014911 Bva04g02372 04 22013636 22014911 ECH