Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02344 ATGGCCACCAAGAGTGAACCTTCAACATCTTCTAACGCGTTTTCCTTTATATCCAAGGGTTGGCGGGAGGTTCGAGATTCCGCCGACGCTGATCTTCGATTGATGCGTGACCGAGCCAACTCATTCAAGAACCTTGCCACGTCCTTTGACCGTGAGCTCGAGAACTTCTTCAATTCTGCATCTGCGTTCTCCGTTCCGCCAATTGGCTCTTCGTCGCCGGCCGAAATCGATTTTGTCAAGAAGCTTCAGCCCAAGCTCTCTGAAATTCGGCGAGCATACTCGTCGCCGGATTTTAGTAGAAAGGTTTTGGAGAAGTGGGGACCCAGGTCGAGGATTCGGATCGACTTATCGGCGATAAAAAATGCAATTGTGTCCGAAGTTGAGGATAGCGGTGGAATTATTGAGTATGATAGGGTTAAGAGAGGCAGGAGATTGAACTTCAAGGAATTCTGGGGGGACTGGAAAGGAGAGGGAGAAGCTGATGGGGAAGGGCAGTCCACTAGGGATTGGGAGCCAATTCGAGCCTTGAAGACGAGGTTAAAAGAATTCGAGAAGCGGAGTTCGTCTATCGAGATTTTTGATAGTTTTAAGAATAGTGAATTCGTGGAGAAAGTGAAGGCAAGCTTGAAACCAATGCGCAAGGAGTCTCAAGATTCAAAGGAAGTGCCACCATTGGACGTGCCTGAACTTTTGGCATATTTTGTTAAGCAATCTGGGCCCTTTCTGGATCAACTTGGAGTCAGAAGAGAGATATGTGACAAGATAGTAGAAAGCTTATATAGCAAACGCAAGAACCATCTCATGCTGCAGTCTCTTTCTGGAGAAGAATCTTCTGTTCTTGGGAATGGAAACATAAATGATGAACTGGATTCGCGAATAGCTAGTGTTCTCCAGAGTACTGGGCACCGTTATGATGGTGGATTCTGGACAGACCATGCAAAACATGATCCATCAGACAAAGAAAGGCATATTGCAATAGTTACTACTGCTAGTCTTCCTTGGATGACAGGAACAGCTGTAAATCCACTATTCCGAGCCGCTTATCTATCGCATGctgcaaagaaaaaagtcaCATTGCTGGTTCCATGGCTTTGTAAATCGGATCAAGAACTAGTTTATCCTAGCAATCTCACTTTTAGTTCACCAGAAGATCAGGAGCTTTATATTCGTAATTGGCTTGAGGAAAGGATTGGTTTTAAGGCAGACTTTAAGATTTCCTTTTATCCTGGAAGGTTTTCAAAAGAAAGGCGGAGTATAATACCCACTGGAGATACTTCTCAGTTTATACCATCCGGGGATGCTGACATTGCTATTTTAGAGGAACCTGAACATTTGAATTGGTATCATCATGGTAAGCGTTGGACAGACAAGTTCAACCATGTTGTTGGTATTGTTCACACAAATTACATAGAATACATTAAGAGGGAGAAAAATGGGGCCTTCCAAGCATTCCTTGTTAAACACATAAACAACTGGGTGGTCAGAGCATACTGCCACAAGGTTCTTCGCCTTTCAGCTGCTACTCAGGATTTACCCAAGTCTGTAATTTGCAATGTTCATGGTGTGaatccaaaatttctaaaaattggagaaaaagtGGCTGCAGAGAGGGAGCTTGGGCAGCAAGCATTCACAAAAGGGGCGTATTTCTTGGGTAAGATGGTCTGGGCAAAGGGATACAAGGAATTGATAGACTTATTAGCAAAGCGTAAGACTGACCTTGATGGATTCAAGTTGGATGTATTTGGAAATGGAGAGGACGCTCGTGAAGTTCACAGTGCAGCTAAAAGGCTGGATTTGAATCTCAACTTTCAGAAAGGAAGAGACCATGCAGACGATTCTCTTCATGGGTACAAAGTTTTTATAAATCCTAGCATTAGTGATGTGCTATGCACAGCTACAGCTGAGGCTCTTGCTATGGGAAAATTTGTAGTTTGTGCAGATCATCCATCAAATGAGTTCTTCAGGTCATTCCCCAATTGTTTGACTTACAAGACATCTGAAGAGTTTGTTGCCAAAGTAAGAGAAGCCTTAGCAAACGAACCCCATCCTCTTACACCTGAGCAAAGATACCAACTTTCGTGGGAGGCTGCTACTCAAAGATTTATGGAATATTCTGAGCTTGATAAAGTCTTGAACAATGATGGTGCAAAATCGAGTACCGATAATGGAAGGCCTATGACAAAGTCAGTATCAATGCCTAGTCTGACAGAACTTGCTGATGGTGGCTTAGCATTTGCTCACTACTGTCTCACTGGGAATGAATTCCTAAGACTATGCACTGGAGCAATACCCGGGACTCGTGACTATAACAAGCAGCACTGTAAAGACCTTAATCTCCTACCCCCACAGGTTGAAAACCCTATATATGGCTGGTG 2378 0.431 MATKSEPSTSSNAFSFISKGWREVRDSADADLRLMRDRANSFKNLATSFDRELENFFNSASAFSVPPIGSSSPAEIDFVKKLQPKLSEIRRAYSSPDFSRKVLEKWGPRSRIRIDLSAIKNAIVSEVEDSGGIIEYDRVKRGRRLNFKEFWGDWKGEGEADGEGQSTRDWEPIRALKTRLKEFEKRSSSIEIFDSFKNSEFVEKVKASLKPMRKESQDSKEVPPLDVPELLAYFVKQSGPFLDQLGVRREICDKIVESLYSKRKNHLMLQSLSGEESSVLGNGNINDELDSRIASVLQSTGHRYDGGFWTDHAKHDPSDKERHIAIVTTASLPWMTGTAVNPLFRAAYLSHAAKKKVTLLVPWLCKSDQELVYPSNLTFSSPEDQELYIRNWLEERIGFKADFKISFYPGRFSKERRSIIPTGDTSQFIPSGDADIAILEEPEHLNWYHHGKRWTDKFNHVVGIVHTNYIEYIKREKNGAFQAFLVKHINNWVVRAYCHKVLRLSAATQDLPKSVICNVHGVNPKFLKIGEKVAAERELGQQAFTKGAYFLGKMVWAKGYKELIDLLAKRKTDLDGFKLDVFGNGEDAREVHSAAKRLDLNLNFQKGRDHADDSLHGYKVFINPSISDVLCTATAEALAMGKFVVCADHPSNEFFRSFPNCLTYKTSEEFVAKVREALANEPHPLTPEQRYQLSWEAATQRFMEYSELDKVLNNDGAKSSTDNGRPMTKSVSMPSLTELADGGLAFAHYCLTGNEFLRLCTGAIPGTRDYNKQHCKDLNLLPPQVENPIYGW 792
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02344 792 Gene3D Glycogen Phosphorylase B; 453 521 - -
Bva04g02344 792 CDD Glycosyltransferase_GTB-type 453 655 - -
Bva04g02344 792 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 2, CHLOROPLASTIC 6 792 IPR044525 GO:0046481
Bva04g02344 792 Gene3D Glycogen Phosphorylase B; 522 678 - -
Bva04g02344 792 PANTHER DIGALACTOSYLDIACYLGLYCEROL SYNTHASE 1, CHLOROPLASTIC 6 792 - -
Bva04g02344 792 Pfam Glycosyl transferases group 1 549 684 IPR001296 GO:0016757
Bva04g02344 792 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 324 704 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02344 Bva-Chr4 21886516 21891335 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02344 12 616 Glycosyltransferase AT3G11670 70.261 0.0 857
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02344 K09480 - gmx:100796354 1362.82
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02344 04 21886516 21891335 Bva04g02344 04 21886516 21891335 ECH