Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02335 aTGGATCCGGCGAAGACGCCGCTTGGCCAGATGCTATTGGAAGAGATCACTCCGGTTGTCATGGTCTTTTCTACCCCACTCGCTGAAGAATCATGTCTCAAAAACGGTCTTTCCTTCCTTCAGATGGTTGCCCCATTCTGCTCCTTCGACAACATTGACGTGCCTGTAAGGACCGCCAGTGATCAGCCCTATAGGCTTCATAAGTTCAAATTACGGTTATTTTATGCTTCGGATATCAGAAAGCCTGATGTAGAGGTAGCTAAAGAGCATTTGAAACAAGTTATCTCAGATGCTGGAGAGAAAGAGATTTCTCAGCTGTCATCGGATGCACGAGAAATCGATCATGTACTTGCTGGTTCTGAATCTGGAAATACACCGTCAtggtttcaaatttttaataatgagCTTGTCCGTATGGTCTCCTTTTCAGACCATGAAGCTTTTGACCATCCCGTGGCATGCCTTTTGGCTGTGTCTTCAAAGGATGAACAGCCTATTAATAGATTTGTTGACCTCTTTAACACCAACAAACTGCCTTCCCTTCTTAATGATGGTGCAATGGATCCTAAGATTTTGAAGCATTACTTGTTAGTGCATGATAATCAAGAGGGCCTCAGAgacagAGCGACTAAAATATTGACAGATATGAGGAGTACATTTGGTTCAAGTGACTGTGCATTGCTTTGCATTAATTCTTCACAAGATACTCCAATCAAACATCAGGAGAATCCTTGGGCTTCTTATAATTATGATGCTTCACCCAGTAAAGACCTTGGTTGCTTTCTTAATGAGGATGACATTAATGAGATCAAAGATCTCATGCAAGATCTATCATCTAAGCACATCATTCCAAATATGGAACAAAAGATCCGTGTGCTCAATCAACAGGTTTCTGCTACACGGAAAGGTTTtagaaaccaaataaaaaatttatggtggagaaaagggaaagaagatGGTGTAGATTCTCTCAATGGTCCTATGTATACCTTCAGCTCCATTGAATCCCAAATTCGAGTTTTGGGTGATTATGCTTTCATGTTACGAGATTACGAACTTGCCTTGTCAAATTATCGCCTTATTTCCACAGATTACAAGCTTGATAAAGCCTGGAAACGATATGCGGGTGTGCAGGAAATGATGGGACTTACATACTTTATGTTGGACCAATCGAGAAAGGAAGCTGAGTATTGCATGGAAAATGCTTTTAGCTCTTATTTAAAGCTTGGAACGTCTGGTCAGCAGAATGCAACGAGATGTGGTCTCTGGTGGATAGAAATGTTGAAGACACGAGATCAATTTAAGGAGGCAGCAATTGTTTATTTTCGTATTTGTGGTGAGGACATTTTACAATCTGCTGTGATGCTTGAACAAGCATCCTACTGCTATCTGTTGACGAAACCTTCTATGTTACGTAAATATGGATTTCATCTTGTGCTTTCTGGTGAACACTATAAAAAGTGTGATCAGATCAAACATGCAATTCGTACATATAGAAATGCTCTTACTGTTTTTAGGGGAACCACATGGAGTTATATTAATGATCATGTTCACTTCCATATAGGACAGTGGTATGCTTCTCTTGGGATGTGTGATGTGGCTGTCAAGCATATGTTGGAAATCCTGGCCTGTAGTCACCAGTCCAAGACAACACAGGAGTTATACCTGGCTGACTTTCTCCAAATTGTTGAGAAAACAGGACGGACATTTGAGGTATCAAAACTTCGGTTGCCAGTCATCAATATCTCTTCTCTCAAGGTTGTTTGTGAAGATCACCGGACTTTTGGATCACCTTCAGCTgCTAACACCCGAGAAGGCTTGTGGCGTTCTTTGGAGGAAGAAATGATTCCCTCATTCTCTTCTGTTAAAACTAATTGGTTGGAGTTGCAATCAAAGCTTATCTCAAGAAAGCATATCGAATCAAATGTTTGTGTTGAAGGAGAAGCGGTGAAAGTGAATATTGAATTCAGGAACCCTCTGCAAATTTCTATTCCCATATCTGGTGTTACCCTGATATGCAAGCATTCTCCCAGGACTGATGAAATTAAATCAGATGAAAATACGTCAAACATGAAGAATGATAATGATGGTACATGTGAAAAGTTGACTGCAAGCAGGGACATTAGCTCTGACAATTCTTCATTTATAGTGTCTGAGGTGCAATTGTCAGTCACTCCCAGAGCAGAAGGTACTCTGGAAATTCTCGGTGTTAGATGGAAATTGTCAGGTACTATAGTTGGTTTTCACAACTTTGAGTTTAGTCATCAGAAGAATGTTgtaaaaggaagaaggaaaagcAAGCGCTCACCTAATCAAAACTTGAAGTTTATGGTGATTAAGAGCATACCAAAGCTCCAAGGGGCTATTTCTCCATTCCCTGAAAAGGCACACGTGGGAGATTTACTACAGCTTGTTTTGGAGCTGAGGAACCCGTCAGAGATTCCTGTTAAGAAtctgaagatgaagataaatCATCCTAGATTCCTGAATATTGGGAATCAGGAAAGTTTGAAGTCAGAATTTCCTGCTAgcttaataaagaaaacagatTCAGTACAGAGTGGTGAACATGCGAATCCTAATAACGTATCTGATACAGTCTTTCTGTTTCCAGAGGGCACTACAATTCAAGGAGAAACACCCTTGTTGTGGCCTCTTTGGTTTAGGGCTGCTGTTCCTGGTgatatttctctttatatgAGCATATATTATGAGATGGGAGATATAACAAGTGTCATCAGATACCGCACTCTTCGCTTGCATTACAATGTGCAGGTGTTGCCATCTTTAGATGTGACTTTTCATATCAGTCCTTCCCTGTTGAAAATACAAGAGTTCCTTGTTCGAATGGATGTTATTAACAACACAAGCTCAGAAAGTTTCCAGATTCACCAGTTGTCATCTATTGGGAATCACTGGGAAATCTCGTTACTTCAACCTCCTGATACTATTTTTCCTTCAGAATCATTAATGGCTGGTCAGGCAATATCATGTTTCTTCACACTAAAGAATTGCAGGAGATTTACTTCTGATGACAGCATATCTACCATCTCTAAACCTGTTGAAAGTGATGCAAGATTGGTTCCTCAGGGTAGTGAGGCTCCTGTTTACGATATGAATAGTATGCCTTTGGTCAATTTTCACCATTATGAAAGATTGCATCAGGAGCTGCCACATGAGGATCAGGGAAACCCGAACACTGTTGACTTTGTATTGATCTCTCGGCCACTGCATAGTAACTCTCTTGTTATGTCTCACCATGCATGTCACTGCAGCACTGCTAGCACGGGCCCTATTTCATGGCTCGTAGATGGATCTCAAATATTACATCATAATTTCTCTGCATCTTTCTGCGAAGTAAATCTGAAGATGCATCTTTACAATTCTGCCGGTGCCACTGCTTTTGTGCGCATTAACACCTTTGATTCTTCCGGTAATGGCGGTCATCTGAAAGGTGGAAATGCAGTTCAACCAGCAACTCCATCTGATAACCAAGCTGGGTGGCATGATGTCCCACCAgtgaatgaaattaaaatcgCATCAAGTGCTCTTGGAACCCAATCAGGAAAGACTCTATCATTAGGAGGCGTCTCCCCGTACATTTGGACTGGGTCAAGCTCCACAAATGTCCACATTGAACCCATGTCCTCAGCCGAGATTCCTCTTCAGATCTGTGTGTTCTCTCCTGGGACATATGATctgtcaaattattttctgcaTTGGAACCTTGTTTCTTCTCAAGCTCAGGGAGAACAACCTTCAGGGAAGTGCCAGGGATATACATATTATCTTACCGTGCTGGACCAGTGCACTTG 3815 0.3971 MDPAKTPLGQMLLEEITPVVMVFSTPLAEESCLKNGLSFLQMVAPFCSFDNIDVPVRTASDQPYRLHKFKLRLFYASDIRKPDVEVAKEHLKQVISDAGEKEISQLSSDAREIDHVLAGSESGNTPSWFQIFNNELVRMVSFSDHEAFDHPVACLLAVSSKDEQPINRFVDLFNTNKLPSLLNDGAMDPKILKHYLLVHDNQEGLRDRATKILTDMRSTFGSSDCALLCINSSQDTPIKHQENPWASYNYDASPSKDLGCFLNEDDINEIKDLMQDLSSKHIIPNMEQKIRVLNQQVSATRKGFRNQIKNLWWRKGKEDGVDSLNGPMYTFSSIESQIRVLGDYAFMLRDYELALSNYRLISTDYKLDKAWKRYAGVQEMMGLTYFMLDQSRKEAEYCMENAFSSYLKLGTSGQQNATRCGLWWIEMLKTRDQFKEAAIVYFRICGEDILQSAVMLEQASYCYLLTKPSMLRKYGFHLVLSGEHYKKCDQIKHAIRTYRNALTVFRGTTWSYINDHVHFHIGQWYASLGMCDVAVKHMLEILACSHQSKTTQELYLADFLQIVEKTGRTFEVSKLRLPVINISSLKVVCEDHRTFGSPSAANTREGLWRSLEEEMIPSFSSVKTNWLELQSKLISRKHIESNVCVEGEAVKVNIEFRNPLQISIPISGVTLICKHSPRTDEIKSDENTSNMKNDNDGTCEKLTASRDISSDNSSFIVSEVQLSVTPRAEGTLEILGVRWKLSGTIVGFHNFEFSHQKNVVKGRRKSKRSPNQNLKFMVIKSIPKLQGAISPFPEKAHVGDLLQLVLELRNPSEIPVKNLKMKINHPRFLNIGNQESLKSEFPASLIKKTDSVQSGEHANPNNVSDTVFLFPEGTTIQGETPLLWPLWFRAAVPGDISLYMSIYYEMGDITSVIRYRTLRLHYNVQVLPSLDVTFHISPSLLKIQEFLVRMDVINNTSSESFQIHQLSSIGNHWEISLLQPPDTIFPSESLMAGQAISCFFTLKNCRRFTSDDSISTISKPVESDARLVPQGSEAPVYDMNSMPLVNFHHYERLHQELPHEDQGNPNTVDFVLISRPLHSNSLVMSHHACHCSTASTGPISWLVDGSQILHHNFSASFCEVNLKMHLYNSAGATAFVRINTFDSSGNGGHLKGGNAVQPATPSDNQAGWHDVPPVNEIKIASSALGTQSGKTLSLGGVSPYIWTGSSSTNVHIEPMSSAEIPLQICVFSPGTYDLSNYFLHWNLVSSQAQGEQPSGKCQGYTYYLTVLDQCT 1271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02335 1271 SUPERFAMILY TPR-like 435 550 IPR011990 GO:0005515
Bva04g02335 1271 Pfam ER-Golgi trafficking TRAPP I complex 85 kDa subunit 168 518 IPR024420 -
Bva04g02335 1271 PANTHER TRANSPORT PROTEIN TRAPP 8 1268 IPR024420 -
Bva04g02335 1271 Gene3D Tetratricopeptide repeat domain 334 554 IPR011990 GO:0005515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02335 K20305 - gmx:100809666 1999.17