Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02306 ATGTCCTGGTTCTCTCGCTTGCGTTCTTCGTCCAAGCTCTTCAACCATAATTTCCGCGCCTCAAATTTTCATAACATCAGAACCCACAAAAATGCACCCGCTGCAAATGTTTTCAACTTCGAGAGAACGAAGAACCCATGGCTGACATGGTCAGGCTCTGTGGTACCTTTGGCCCTCGCTGTTTATGCTGGATCACTTGCTTTTCAACCCCATTTCAATCCTTCACTCTGTGACGCTCCTAGAGCTAATGCCCGTGTCAGCATTGGAGGCAAAGGAAAAACCCAGTTTGAGGTTAAGGGATCTCACCGTGATGTTCCAAAGGAGCTTCTTGAAGAGATGAGAGCCATCTGTCAGGATAACATGACAGTTGATTATGACGAGAGATACAACCATGGAAAACCACAGAACAGCTTTCACAAAGCTATTAATATCCCTGATGTGATTGTTTATCCAAGATCTGAAGAGGAAGTCTCCAAGATTGTCAAGCTATGTGATGATCATAAGGTTCCTATTGTACCCTATGGTGGGGCTACATCAATTGAGGGTCACACCTTATCCCCTAATGGAGGTGTTTGCATTGACATGTCATTAATGAATCGAGTGAAAGCACTGCATGTTGAAGACATGGATGTGGTCGTTGAGCCTGGAATTGGATGGATGGAGCTAAACGAGTATTTAGAACCTTATGGTCTGTTTTTTCCACTTGATCCAGGTCCTGGTGCCAGCATTGGAGGCATGTGTGCTACACGGTGTTCTGGGTCTTTGGCTGTGAGGTATGGAACTATGCGTGACAATGTCATCAGTCTAAAGGTAGTTCTTGCCAATGGACGTGTTGTCAAAACTGCATCTCGTGCTAGAAAGAGTGCTGCAGGGTATGATTTGACCCGCTTGATGATTGGTAGTGAAGGAACACTGGGTTTAATAACAGAAGTGACACTGCGTCTTCAGAGAATTCCCCAGCATTCTGTGGTTGCAATGTGCAATTTCCCTTCCGTGAAGAATGCAGCAGATGTTGCTATTGCCACTATGATGTCTGGTATACAGGCGTCAAGAATGGAGCTATTGGATGAGGTCCAAGTGAGAGCCATCAATATCgctaatgagaagaaattgcCCGAGTATCCAACTCttatgtttgaatttataGGAACAGAGGCGTATGCACGTGAACAAACACAAATTGTTCAGAGAATTGTCTCTGAGAACAATGGCTCAGATTTTGTATTCGCAGAAGAACCTGAAGCAAAAAAAGAACTTTGGAAgATAAGGAAGGAGGCGCTCTGGGCTTGCTTTGCAATGAAACCTGATATGGAGGCAATGATTACGGATGTATGTGTCCCTTTATCTCACCTATCAGATTTGATTTCAAGGTCTAAAAAGGAGCTGGATGCATCACCACTGGTTTGCGCTGTGGTTGCCCATGCTGGGGATGGCAATTTCCACACGGTGATTCTATTTAACCCTAGCGATGAAGAACAACGAAAGGAGGCAGAGAGACTAAACCAATTTATGGTTCATGCTGCCCTGTCATTAGAAGGAACTTGTACCGGAGAACATGGTGTTGGCACAGGGAAAATGAAGTATCTTGAAGAAGAACATGGAACAGAAGCATTGAGGACAATGAAAAGGATAAAAGCAGTCCTAGATCCCAACAACATCTTGAATCCGGGAAAGCTCATTCCACCCCATGTTTGTTTGTA 1700 0.4376 MSWFSRLRSSSKLFNHNFRASNFHNIRTHKNAPAANVFNFERTKNPWLTWSGSVVPLALAVYAGSLAFQPHFNPSLCDAPRANARVSIGGKGKTQFEVKGSHRDVPKELLEEMRAICQDNMTVDYDERYNHGKPQNSFHKAINIPDVIVYPRSEEEVSKIVKLCDDHKVPIVPYGGATSIEGHTLSPNGGVCIDMSLMNRVKALHVEDMDVVVEPGIGWMELNEYLEPYGLFFPLDPGPGASIGGMCATRCSGSLAVRYGTMRDNVISLKVVLANGRVVKTASRARKSAAGYDLTRLMIGSEGTLGLITEVTLRLQRIPQHSVVAMCNFPSVKNAADVAIATMMSGIQASRMELLDEVQVRAINIANEKKLPEYPTLMFEFIGTEAYAREQTQIVQRIVSENNGSDFVFAEEPEAKKELWKIRKEALWACFAMKPDMEAMITDVCVPLSHLSDLISRSKKELDASPLVCAVVAHAGDGNFHTVILFNPSDEEQRKEAERLNQFMVHAALSLEGTCTGEHGVGTGKMKYLEEEHGTEALRTMKRIKAVLDPNNILNPGKLIPPHVCL 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02306 566 SUPERFAMILY FAD-linked oxidases, C-terminal domain 323 562 IPR016164 GO:0003824|GO:0050660
Bva04g02306 566 Gene3D - 520 560 IPR016171 -
Bva04g02306 566 Pfam FAD linked oxidases, C-terminal domain 318 559 IPR004113 GO:0003824|GO:0050660
Bva04g02306 566 Gene3D - 438 519 - -
Bva04g02306 566 PANTHER D-LACTATE DEHYDROGENASE, MITOCHONDRIAL-RELATED 83 562 - -
Bva04g02306 566 PANTHER D-LACTATE DEHYDROGENASE 83 562 - -
Bva04g02306 566 SUPERFAMILY FAD-binding/transporter-associated domain-like 106 319 IPR036318 GO:0050660
Bva04g02306 566 Gene3D - 107 337 IPR016169 -
Bva04g02306 566 Pfam FAD binding domain 145 281 IPR006094 GO:0050660
Bva04g02306 566 ProSiteProfiles PCMH-type FAD-binding domain profile. 141 318 IPR016166 GO:0071949
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02306 Bva-Chr4 21650081 21659489 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02306 K00102 - gmx:100803612 920.613
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02306 04 21650081 21659489 Bva04g02306 04 21650081 21659489 ECH