Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02305 atgaaattcgGCGAGAAATTCAACGTGTATCTGCAGGAAGAGCCGGCGTGGTCCGTGGACAAGCAATTCGTTCACATTGAATATAAGCGGTTAAAAAAGGTGCTAAAGAGCTGCCAGAGATGTAAAGTATCGCATACTTCTTACAATTCTGATTTCCCTGAGGAGCAGTTATGTTCTTGCCCCTTGTGTGATCAGATGTTCTTCTCTGAGTTGATGAATGAAGCATCTGCTATATCAGGATACTTTAGTGCAAGAGTTAGGCATCTCCTTCGTCTTCATATTGCTAAAGGAATGCAGAGATATGCATTGTGCTTGAGGCAATGCTTCAAAAATGATAGACAATCTCTGGCACAACAAGGGAGGATGCTGATTCAATACATTTCCATGAATGCTATTGCTATACGGAAAATACTCAAGAAATATGATAAAAAACACAGTTCTGCGAGAggcaaaaatttcaaagccaGAATGCAAGCTGCACACACTGAACTTCTGCACTCACCTTGGCTAATTGAACTGGGAGCCTTCTACGAGAATTGTAATGGGCCACATGGTGGATGTGGTCAATTTTCATGCGATCTCAACGTGACTGAAGCTGTAATGACATTGGTTCTTCCAGattctataaaaattgaatgtgATCTGACTTGTGCAATTTGCTTGGATATTGTTTTCAATCCGTACGCTTTGGGCTGTGGTCATCTTTTTTGCAAGTCATGTGCTTGCTCAGCTGCTTCTGTGATGATTTTCCAAGGGCTTAAAGCTGCGAATCCAGACTCAAAGTGTCCCATATGCAGAGAGGTTGGGGTATATTCCCAGGCAGTGCACATGTTAGAACTAGATCTGCTCTTGAAAAGAAGgTGCAAAGAGTACTGGAAAATGAGGTTGACAGACGAACGAGCTGAGATGTTGAAGCAATCCAAGGAGTACTGGAATTTACAGACTACATATGCAATTGGAATGTA 965 0.4021 MKFGEKFNVYLQEEPAWSVDKQFVHIEYKRLKKVLKSCQRCKVSHTSYNSDFPEEQLCSCPLCDQMFFSELMNEASAISGYFSARVRHLLRLHIAKGMQRYALCLRQCFKNDRQSLAQQGRMLIQYISMNAIAIRKILKKYDKKHSSARGKNFKARMQAAHTELLHSPWLIELGAFYENCNGPHGGCGQFSCDLNVTEAVMTLVLPDSIKIECDLTCAICLDIVFNPYALGCGHLFCKSCACSAASVMIFQGLKAANPDSKCPICREVGVYSQAVHMLELDLLLKRRCKEYWKMRLTDERAEMLKQSKEYWNLQTTYAIGM 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02305 321 ProSitePatterns Zinc finger RING-type signature. 232 241 IPR017907 -
Bva04g02305 321 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1-LIKE-RELATED 1 320 - -
Bva04g02305 321 SMART ring_2 217 265 IPR001841 -
Bva04g02305 321 ProSiteProfiles SPX domain profile. 1 155 IPR004331 -
Bva04g02305 321 ProSiteProfiles Zinc finger RING-type profile. 217 266 IPR001841 -
Bva04g02305 321 Pfam RING-type zinc-finger 217 263 IPR027370 -
Bva04g02305 321 SUPERFAMILY RING/U-box 209 268 - -
Bva04g02305 321 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 200 315 IPR013083 -
Bva04g02305 321 PANTHER E3 UBIQUITIN-PROTEIN LIGASE BAH1 1 320 IPR033326 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02305 Bva-Chr4 21646319 21649094 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02305 K16275 - gmx:100781704 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02305 04 21646319 21649094 Bva04g02305 04 21646319 21649094 ECH