Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02303 ATGGTTCAGTTTCTGTCAAAGCACGCCACCTTCTTCACTGCAAAGCCCTCTCCTTTGAGCACCTTCGTCGTCATTCTCATCCTCTGTATTCTGGGTTTTTATACCCTGCATTACCCACGCTCTTCTTTACTTACTTCTAGAGCCCTGAATGCGTCTCACTTTCAGCATATTTTACTTTCTACTTCATCCAACTATACTATCTCTACGTACCTCCGCGCCCTTACCCTGCATCCTCACCTTGCTGGCACAAAACTCGCCGCTGATACCACCCGTTATGTCCTCAATCATTTCAGTGACCTGGGTCTTCAGACCCACACAGTGAGCTACAAGACCCTTCTCTCGTATCCTGTGCACTCCTCCCTCTCGGTGCATCATAGTGATGGGTCTTCCACGGAGCTTCCATTAACCGAACAGGGTCAGGTTGGCCGGGATGTGGTGACACCTTACCATGCTTACTCGCCATCTGGGTCGGCATACGCGAAAGCGGTGTTCGTAAATTACGGAAGAGAAGAGGACTACCGCGCGCTTGGGGTGCTGGGGGTGAACGTTAAAGGATGCATAGTGATAGCGAGGAAAGGTGACGTTTTGACAAGAGGCGCGGTGATTGAGACGGCAGAGGCCAATGGTGCGGTGGCGGTGCTGTTGTACAGCGACAGTGCCAGGTTTAGGAACGGCTTTGAGCGGGGACACGTAATGAGAGGCATAGGGGACCCACTGAGCCCTGGGTGGGCTGGGGTTAATGGCGGCGAGAGCTTGGATTTGGAAGATAGTGAGGTTTTGAAAAGATTTCCCAAAATTCCATCCATGCCCCTGTCAACTGAGACCGCTGAGACTATTCTAAACTCGCTTGGAGGCGTTCCGGTGCCACTGGAGTGGAGGAACACTCTGCCGTCTAAGGTCAGGAATGTTGGTCCCGGCTCCACAATGCTCAATTTCACTTACCAGGGGGAAAAGAAGGTGGCTACCATTCAAAATGTTTTCGCCATCATAAAGGGATCGGAAGAACCCGATCGCTATGTTCTGCTTGGGAACCACAGAGATGCATGGACTTATGGTGCTGTTGATCCCAGTAGTGGGACTGCAGCCCTACTTGACATTGCTCGTcggttttctcttttgttgcgTTTGGGATGGACTCCGAGGAGGACTATCATTCTTTGCAGTTGGGATGCAGAGGAGTTTGGAATGATAGGATCCACTGAGTGGGTTGAACAAAACCTTGTCAACCTGGGTTCCAAAGCTGTGGCATACCTGAACGTGGACTGTGCTGTTCAGGGGCCTGGATTCTTTGCTGGCTCAACTCCTCAGCTAGACAATCTCCTTCTTGAAGTCACAAAAATggTCAAGGATCCTGATTCTGAGGGTGCAACAATACATGATAATTGGGAAGCAACTGGTGAAAATTCTAATATTCAGAGGCTCAGCAGAGTGGATTCTGATTTTGCTCCATTTTTGCAACATGCGGGGGTTCCTTCTATTGACATGTATTATGGAAGAGATTTTCCTGTATACCACACTGCTTTTGACTCATATAACTGGATGATAGAGAATGGAGACCCATTCTTTCAGCGCCACGTGGCTGTTGCTGGAGTTTGGGGACTTCTAGCGCTTCGTCTGGCTGATGATTCCGTTCTTCCTTTTAATTACCTTCCTTATGCAGATCAGTTACAGGTGTACAAGAACACTTTGAGCAACTTGTTAGATCAACGAATAGATCTAAATCCATTTACTACATCATTACAAGAATTTGCTTCTGTCGCCAAAGAAGCTAATGATGAATCAAAGAAACTGAGATTGCAAGAAACTGCAGGCTGTTCTATAGACATGAAAAAACGAGCGTTGAATGATAGATTAATGCTGGCTGAAAAAGGCTTCCTGAACGAAGATGGACTTCGAGGAAAGCATTGGTTCAAGCATCTTGTGTTTGGGCCTCCTGGTGACCATGAAAGCAAGCTTCATTTCTTCCCTGGAATAGTTGATTCCATTGCTTGGTCAACCAGAAtgagagaaaaggaaggacGGGCTGCAATCCAGCACGAGATCTGGAGGGTTGCCAGAGCCATTCAAAGAGCTGCTTCTGCACTGAGAGGAGAATTCACCTTTAATCAATA 2111 0.4704 MVQFLSKHATFFTAKPSPLSTFVVILILCILGFYTLHYPRSSLLTSRALNASHFQHILLSTSSNYTISTYLRALTLHPHLAGTKLAADTTRYVLNHFSDLGLQTHTVSYKTLLSYPVHSSLSVHHSDGSSTELPLTEQGQVGRDVVTPYHAYSPSGSAYAKAVFVNYGREEDYRALGVLGVNVKGCIVIARKGDVLTRGAVIETAEANGAVAVLLYSDSARFRNGFERGHVMRGIGDPLSPGWAGVNGGESLDLEDSEVLKRFPKIPSMPLSTETAETILNSLGGVPVPLEWRNTLPSKVRNVGPGSTMLNFTYQGEKKVATIQNVFAIIKGSEEPDRYVLLGNHRDAWTYGAVDPSSGTAALLDIARRFSLLLRLGWTPRRTIILCSWDAEEFGMIGSTEWVEQNLVNLGSKAVAYLNVDCAVQGPGFFAGSTPQLDNLLLEVTKMVKDPDSEGATIHDNWEATGENSNIQRLSRVDSDFAPFLQHAGVPSIDMYYGRDFPVYHTAFDSYNWMIENGDPFFQRHVAVAGVWGLLALRLADDSVLPFNYLPYADQLQVYKNTLSNLLDQRIDLNPFTTSLQEFASVAKEANDESKKLRLQETAGCSIDMKKRALNDRLMLAEKGFLNEDGLRGKHWFKHLVFGPPGDHESKLHFFPGIVDSIAWSTRMREKEGRAAIQHEIWRVARAIQRAASALRGEFTFNQ 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02303 703 PANTHER F10A2.10 PROTEIN-RELATED 39 700 - -
Bva04g02303 703 Gene3D Zn peptidases 66 546 - -
Bva04g02303 703 Coils Coil 580 600 - -
Bva04g02303 703 CDD M28_PSMA_like 321 547 - -
Bva04g02303 703 Pfam PA domain 160 224 IPR003137 -
Bva04g02303 703 Gene3D - 119 316 - -
Bva04g02303 703 PANTHER N-ACETYLATED-ALPHA-LINKED ACIDIC DIPEPTIDASE 39 700 IPR039373 -
Bva04g02303 703 SUPERFAMILY Zn-dependent exopeptidases 69 544 - -
Bva04g02303 703 Pfam Peptidase family M28 325 512 IPR007484 -
Bva04g02303 703 SUPERFAMILY PA domain 112 327 IPR046450 -
Bva04g02303 703 Gene3D - 550 700 IPR036757 -
Bva04g02303 703 SUPERFAMILY Transferrin receptor-like dimerisation domain 546 698 IPR036757 -
Bva04g02303 703 Pfam Transferrin receptor-like dimerisation domain 571 695 IPR007365 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02303 Bva-Chr4 21635745 21640034 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02303 K01301 - gmx:100818733 1051.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02303 04 21635745 21640034 Bva13g02263 13 17419723 17425190 BWGD
Bva04g02303 04 21635745 21640034 Bva04g02303 04 21635745 21640034 ECH