LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva04g02293	ATGTCAAGTATGGACCTTCCTACAACTGAAGTGGACCTTGGGCCTGAGAAGATTGAAGATAAGAAAGAGCTCCCTTTCCCTTGTGATCTTTGTGATACTGAAGTAGTTCACAAGATAGCTCAAATGTTTATGCCCGGATTAGCCACAGCCTGTGTTGATAACACATCAGGAGATATCTTCAGAACTCCTGGTTCAGTGGCCGCTGATTTGAGAAATGAGATGATAGAGTATCTTACCCAGAGAAGCGAATCATTTGTTGCTGAATCTGTTATCTTAGAAGGTGGTCCAGAGGCAGAAGTATCAGATAACccttttgatataatttctGATTTTGTTGATGACTTTGCGAGTACAAAAAGGAATTTGTTTAGTAGGGTTTCAGGATGGCTGCTGAATGACAAGAGAGAAGACAAAATAGATGATTTTATTCAAGATATGGAAAGGGATGGATTCTGGTCACTGGATAAGAGAGAAACCATTGCAGAGACTTTGCTCAAGAATGTTGACTTCAAGTGCTTATTCCATTGTAGCTTGAAATCCAATACTGAGGAAGAGCTTGCCAGTCATGTTTACAACTGCAACTTTAGATCTATGATCTGTGAAAATGAGGGTTGTGAATCCAGATTTTGTGCTGCTAATTTGGATAAGCATGATGCAATTTGTCCTTTCAAGATAATTCCATGTGAGCAGAAGTGTTCTGAAAACATTATGAGACGTGCAATGGACAGGCACTGCATAACCAGTTGTCCAATGAGGCTTGTGAACTGTCCTTTTTATTCAGTGGGTTGCCGGGTTGCTATTCGACAATGTGATATTGTAAAACATCGTTCAGATGAACTTCATTCTCATTTGCTGTACATTCTTCGAGGAATCTACAAGGATGCATCTGATGAAGATCTTAAACGACGAGTGGAGCAAATTGTAGAGGCTGAATCAAACAGCCGGTTAGAAGGAGCACGAGATGTGAGACCTTTAAAGAACATTGTCAAGGGGATTGAAGCTAAGCTAGGGCCTTTTGAATACACTCCCCCGAGTCCCCCGaaggaaaatattgaagagaaaaatgccAATAACGAGGATGCTGAAGACAGTgccacaaaagaaaacagcgaagagaaaaacaagaacGAGAATGCTGAAGATGGCGCGACCAAGGAAaataatgaagagaaaaatgccAAGAACGAGAATGCTGAAGATGCCAATGCTGATGGTGCCGCGAAGGAAAATagtgaagagaaaaatgccAAGAAGGAGGATGCTGAAGACAGTGACTTGGAAAAAAAGAGCACTGAACAGACTGCAAATGTGGAAAATTCTGAAGCAAGTTCcatcatgaataaaaatacTGCGGATAATAATAACGTTGACATTGAAGACAAGGACagtcaaataaaaaaccaGAGCGGTGAAGAGAGCACACAGCACTCAAATATGGAAAATTCATCAGAAAAATCTGCAGTAAGTTCAACTGCGGATAGCAGTACTGCAGAGAATAATGTCAATAGTGAAGCCAGGGACAGTCAAATGAAAAACCAGAGCGATGAAGAGAGCGCACAGAATGCCAATATGGAAAAATCATCGGATAAACCTGAAGTCAGTGCTCTGAAAAAGGACAGTGAAGAAACTAGCAAGGAAAAAGATGCTGAAGATAGTGATTTGGAAATCAAGAGTAAGGAAGAGAGCAAACAGACTAAACCAGCAAActcattata	1715	0.3761	MSSMDLPTTEVDLGPEKIEDKKELPFPCDLCDTEVVHKIAQMFMPGLATACVDNTSGDIFRTPGSVAADLRNEMIEYLTQRSESFVAESVILEGGPEAEVSDNPFDIISDFVDDFASTKRNLFSRVSGWLLNDKREDKIDDFIQDMERDGFWSLDKRETIAETLLKNVDFKCLFHCSLKSNTEEELASHVYNCNFRSMICENEGCESRFCAANLDKHDAICPFKIIPCEQKCSENIMRRAMDRHCITSCPMRLVNCPFYSVGCRVAIRQCDIVKHRSDELHSHLLYILRGIYKDASDEDLKRRVEQIVEAESNSRLEGARDVRPLKNIVKGIEAKLGPFEYTPPSPPKENIEEKNANNEDAEDSATKENSEEKNKNENAEDGATKENNEEKNAKNENAEDANADGAAKENSEEKNAKKEDAEDSDLEKKSTEQTANVENSEASSIMNKNTADNNNVDIEDKDSQIKNQSGEESTQHSNMENSSEKSAVSSTADSSTAENNVNSEARDSQMKNQSDEESAQNANMEKSSDKPEVSALKKDSEETSKEKDAEDSDLEIKSKEESKQTKPANSL	571

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva04g02293	571	Coils	Coil	348	396	-	-
	Bva04g02293	571	PANTHER	NEUROFILAMENT HEAVY POLYPEPTIDE-LIKE	3	548	-	-
	Bva04g02293	571	SUPERFAMILY	TRAF domain-like	202	272	-	-
	Bva04g02293	571	Pfam	TRAF-type zinc finger	217	275	IPR001293	GO:0008270
	Bva04g02293	571	MobiDBLite	consensus disorder prediction	435	453	-	-
	Bva04g02293	571	MobiDBLite	consensus disorder prediction	468	528	-	-
	Bva04g02293	571	MobiDBLite	consensus disorder prediction	352	434	-	-
	Bva04g02293	571	ProSiteProfiles	Zinc finger TRAF-type profile.	217	264	IPR001293	GO:0008270
	Bva04g02293	571	PANTHER	TNF RECEPTOR ASSOCIATED FACTOR	3	548	IPR043211	-
	Bva04g02293	571	MobiDBLite	consensus disorder prediction	337	571	-	-
	Bva04g02293	571	Gene3D	Zinc/RING finger domain, C3HC4 (zinc finger)	216	281	IPR013083	-
	Bva04g02293	571	MobiDBLite	consensus disorder prediction	530	564	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva04g02293	-		-	gmx:100799182	556.214

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Bva04g02293	04	21596339	21599914	Bva04g02293	04	21596339	21599914	ECH