Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02260 ATGGGAACTCATTCCAATTCAGCAGCAGAGTCAGAGAAGAGGCTCCATGTTTCCCATTTTAGCCATCCACATCCATTACAATTACAACCTTCAAACCCACCCAATACTGCTGCACCAAATCTAACCTGCTCTGGGTGCAACCTCAACATTACGTCTGGCAACGACTACTATCAATGCGAGACCTGCGCTTTCGCTCTTCACTATCTTTGCTACAAGATGCCCATGATAACGCGTCACCCTGCGCATTCAACCCACGACTTAGTCCTCCTTTTTATACGTCCATTTCCACCAGCTACCAAAGCCACCATCAAGTGCTTTGCTTGTGGACACTATGTCACTGGCTTCTGCTACCACTGTGGTGAATGCACCAATGTCTATTACCATTCTCTCTGCCTGGCCATGCCTATTTCCATAACAATCAGCTACCACACCCATAATATGAAACTAGAATTTTCACCCCCTTATGATTTCTACTGTGATTTGTGCCAGAAACCCAGTTACAACGGGTGGCTCTACAGGTGCAACATGTGCGAGTTTGACACGCATTTAGCTTGTGCCATTCAAAATTTAGAGTCCAAGTCACTAgaaaatccatctttcttcaAATCAAACACTTTGTTAAAGCATATTACGAGCACCCAACTGACCAACAAGAACATCAATGGAAGCGTAGATAAGAATATCGTAGCCGTAGGCTATGAGCTGATGCATTTGGTGTCACAGAAAATCGGCGGGGAAATCACTAGTAACAGCAAGGCCAGTGCAGTTTCTGGATGGGACAAGAGATTACGTAGTCCCAAACGGAAGAACATCACGAAGCTTATTGAATTACAAAAAACAGAACCAAGCCCTGTTGGCAGTTCAGCAGAGAAAATGACCCCACGTTCGGATGTAGCAAGTCCAAGCTACCAATTTAGCGAGGGACTGTTTTCAATAGATTTGACCAAGCCTTTTGATCCCAAAAGCCAATTAGTAACAAAAGAAGCTGGTAATCTTGACGCAACCAGAAGTGTAGGTGATCAGGTTAAAGAAACAACTGGCCACGGCGTAGCTTCTAAGCCAATGCCGCAGAGCATGTTGAGCAATTCTGGACAAGCCAATCAACCATTTGttctttctaattggccaagCTTTAATTCATGCAATGCGAGTCGGATGAAAGAAGCATTCTTGAATGCACAAACTACTGGTGATTTTGGCAGATCATCAAGCCAAATAACTTATAAGCAAGAATCAGTAAGCCCAAATTCCTTCACTGCACCACATGCTTatgatta 1277 0.4276 MGTHSNSAAESEKRLHVSHFSHPHPLQLQPSNPPNTAAPNLTCSGCNLNITSGNDYYQCETCAFALHYLCYKMPMITRHPAHSTHDLVLLFIRPFPPATKATIKCFACGHYVTGFCYHCGECTNVYYHSLCLAMPISITISYHTHNMKLEFSPPYDFYCDLCQKPSYNGWLYRCNMCEFDTHLACAIQNLESKSLENPSFFKSNTLLKHITSTQLTNKNINGSVDKNIVAVGYELMHLVSQKIGGEITSNSKASAVSGWDKRLRSPKRKNITKLIELQKTEPSPVGSSAEKMTPRSDVASPSYQFSEGLFSIDLTKPFDPKSQLVTKEAGNLDATRSVGDQVKETTGHGVASKPMPQSMLSNSGQANQPFVLSNWPSFNSCNASRMKEAFLNAQTTGDFGRSSSQITYKQESVSPNSFTAPHAYD 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02260 425 MobiDBLite consensus disorder prediction 278 297 - -
Bva04g02260 425 MobiDBLite consensus disorder prediction 401 419 - -
Bva04g02260 425 MobiDBLite consensus disorder prediction 401 425 - -
Bva04g02260 425 PANTHER - 16 313 - -
Bva04g02260 425 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN PROTEIN 16 313 - -
Bva04g02260 425 SUPERFAMILY Cysteine-rich domain 52 145 IPR046349 -
Bva04g02260 425 SMART PHD_3 42 80 IPR001965 -
Bva04g02260 425 SMART PHD_3 104 163 IPR001965 -
Bva04g02260 425 Pfam C1 domain 20 70 IPR004146 -
Bva04g02260 425 Pfam C1 domain 142 186 IPR004146 -
Bva04g02260 425 MobiDBLite consensus disorder prediction 281 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02260 Bva-Chr4 21429974 21431251 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02260 - - gmx:102661734 361.303
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02260 04 21429974 21431251 Bva04g02260 04 21429974 21431251 ECH