Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02259 ATGGATAAGATTGAACATTTCAGCCATAGACACCCATTGGTATTGCAGCAATCTGAGCAAAAAACTGATGACGAGAAGGAGCAACGACTTTGCTCAGGTTGCGAAGAACCAATTTCAGGTGCTTGCTACTGTTGCTTGGATTGCGACGATAACTTTATCCTTCACAAATCATGCGTCGAACTTCCACGTCAGTTGAAGCGCCCAACTCACCCCCGGCACCCCCTTATCCTCCTTTCCAAGCCCCCGTATCCCTGCATTTGTAGCCTTTGCAGACGCAGGATACGCAAGTTTGTGTACCATTGTTCTCTTTGCCAATATGACCTTGACATAGCCTGTGCTTCTCTTTGCGGTCTGATCGAAGATGGTCATAAACATTCGTTCATCTCCTTGAAGAGGCCAATTGAATTCCCCTGTTACGCTTGTGGTGTCACCGAAGCCGATGGCTTCCCCTTTCTATGTACAGTTTGCCAAATCTGGGTTCATCCTACCTGCGCTCAGCTACCTCAGACCATCAAAATCGTTAGCCACAACCACAATTTGAATCTCAATTTTTCCCTTCATAAAGTTTATGGATTCAAGAACATGCTCTGCAAGGTTTGCAACATTAATATGAGCTCAAGTTGTGCGGGTTATTTTTGTTCAGAGTGCACCTACCCTGTACATTTGAAGTGTGCTGCTCAAGCTGAACAAGAGCAATCTAAAGGTGATTCCAAGTCAGAGATGCTAGAATATATAGAGCATGATGAAACTGGTAATCCTTATAAGGTGATCAAGTTAGGAGAAGATGGTAGAGTCGAGGAAATCAAACATTTCAGTCATCACCATGCACTAAAGCTAGTCGAGCAGCAGCGTCATCAAGATGCCGATAAGCTCTGTGATGGGTGCATTCAACCCATCTCCCCTCCCTTCTTTGCTTGTGCCCAAAAttgtagttttcttcttcacaaGAATTGTTCTGAATTACCCAGAACGATAGAACGCCCGTGTCACCAACACCCGCTTAATCTCTTATTCAAAGCACCTCATTTTGAAGGAATATTTAGGTGCGATAACTGTAAATTGTTCTGCAATGGCTTTGTGTATCGCTGTGAAGAGTGTCAATTTGACCTTGATATTCGATGTGGTTCCCTTCCAGAAACACTTGTCCACGAGAATCATGAGCACCCTCTTCTCCTCAACAAGACAACATCAGCTAAGATATGCAAAGGTTGTAATCGTCGTTCCAGACATGTCTTTGTCTGTCAAGTTTGTGATGGGTTTGCTATTGATTACGGATGCGCTACTCTACCATCTAAGACATGGCACATATATGATAAACATCCCCTCAACTTAACCTACGGTCATGCCCTTGACTTAACCTACAGTCTTGACGCCGATTTTATAGACGATTTCAGTGAACGTAACTGTGAAATTTGCAAGGAGAATATGGTTCCAACTCAATGGTCCTACGATTGTGAGGACTGCAATTTCTCTGCTCATCCCCATTGTGTTGTTGGGAAGTCTAACTATGTCAAGTTTGGAAGCAGCTTCATGTATGATGCACACTCACACCCACTTACATTGGTTGAAAAGATCAGGGGTTCCCCTGCTTGTGGTGTTTGTGGAGAACGTTGCGTTGGCTGGGGAGTTGAATGTGGGCAATGCTCATTCTACATGCATCGTGAAGGTGTTTGTTTCTGGGAACAATTCAAAGATAGTGCAGGGCTTTTAAGTCGTGGAAAGGTGAGAACTAGGCTTGCTGCCAACGTATTGGCCGTCACGCCCAATGTAACAAACAAGTG 1781 0.4391 MDKIEHFSHRHPLVLQQSEQKTDDEKEQRLCSGCEEPISGACYCCLDCDDNFILHKSCVELPRQLKRPTHPRHPLILLSKPPYPCICSLCRRRIRKFVYHCSLCQYDLDIACASLCGLIEDGHKHSFISLKRPIEFPCYACGVTEADGFPFLCTVCQIWVHPTCAQLPQTIKIVSHNHNLNLNFSLHKVYGFKNMLCKVCNINMSSSCAGYFCSECTYPVHLKCAAQAEQEQSKGDSKSEMLEYIEHDETGNPYKVIKLGEDGRVEEIKHFSHHHALKLVEQQRHQDADKLCDGCIQPISPPFFACAQNCSFLLHKNCSELPRTIERPCHQHPLNLLFKAPHFEGIFRCDNCKLFCNGFVYRCEECQFDLDIRCGSLPETLVHENHEHPLLLNKTTSAKICKGCNRRSRHVFVCQVCDGFAIDYGCATLPSKTWHIYDKHPLNLTYGHALDLTYSLDADFIDDFSERNCEICKENMVPTQWSYDCEDCNFSAHPHCVVGKSNYVKFGSSFMYDAHSHPLTLVEKIRGSPACGVCGERCVGWGVECGQCSFYMHREGVCFWEQFKDSAGLLSRGKVRTRLAANVLAVTPNVTNK 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02259 593 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 8 558 - -
Bva04g02259 593 Pfam C1 domain 7 59 IPR004146 -
Bva04g02259 593 Pfam C1 domain 68 113 IPR004146 -
Bva04g02259 593 Pfam C1 domain 271 319 IPR004146 -
Bva04g02259 593 Pfam C1 domain 438 497 IPR004146 -
Bva04g02259 593 Pfam C1 domain 328 374 IPR004146 -
Bva04g02259 593 SUPERFAMILY Cysteine-rich domain 514 554 IPR046349 -
Bva04g02259 593 SMART PHD_3 137 201 IPR001965 -
Bva04g02259 593 SMART PHD_3 30 91 IPR001965 -
Bva04g02259 593 SUPERFAMILY Cysteine-rich domain 42 116 IPR046349 -
Bva04g02259 593 SUPERFAMILY Cysteine-rich domain 3 50 IPR046349 -
Bva04g02259 593 SUPERFAMILY Cysteine-rich domain 303 388 IPR046349 -
Bva04g02259 593 PANTHER CYSTEINE/HISTIDINE-RICH C1 DOMAIN FAMILY PROTEIN 8 558 - -
Bva04g02259 593 SUPERFAMILY Cysteine-rich domain 409 505 IPR046349 -
Bva04g02259 593 SUPERFAMILY Cysteine-rich domain 147 226 IPR046349 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02259 Bva-Chr4 21425185 21427740 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02259 - - vun:114181199 637.876