Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02249 ATGGGAGCTGGTGGCCGGACCTCTGTTCCTCTTGCCCAGAGAAAGGCAGAGGCTGATCCTTTGAAGCGGGTCCCATGCACGAAACCCCCATTTACTCTCAGTCAGATCAAGAAGGCAATTCCACCTCACTGCTTTGAGCGCTCTGTTGTGAGATCTTTCTCTTGTGTCATTTATGACCTGACCATTGCTGCCATTCTGTTTTATGTTGCTACCCATTACTTCCAGCACCTTTCTGgccctctttctttcttggctTGGCCTATATACTGGGCTTTCCAGGGGTGCATCCTTACTGGCGTTTGGGTGATTGCACATGAGTGTGGTCATCATGCATTCAGTGACTATCAATGGCTTGATAATGCGGTTGGCCTTATTCTCCACTCCTGCCTCTTGGTGCCTTACTTTTCATGGAAATACAGCCATCGCCGCCACCACTCTAACACTGGTTCTCTTGAACGGGATGAAGTCTTTGTGCCAAAGCAGAAATCTGGAATCCGTTGGTACACAAAGTACCTTACCAACCCACCAGGCAGGCCTTACGACCGCTTTGCTTGCCACTATGATCCATACGGTCCCATCTACTCAGACCGCGAACGACTTCAAATATTCATATCAGATGCAGGAATATTTGCTGTATCCTATGGAATTTACCGTCTTTTTGTGGCCAAAGGACTTGCCTGGGTTATATGTGTCTATGGAGTGCCATTGTTAGTGGTCAATGGATTTTTGGTGTTGATCACATTTTTACAGCATACTCACCCTGCATTGCCACACTACGATTCCACCGAGTGGGATTGGTTTCGAGGAGCTTTGGCAACAGTGGACAGAGACTATGGAATATTGAACAAGGTTTTCCATAACATAACAGACACCCATGTGGTGCATCACTTGTTCTCCACAATGCCGCATTATCATGCAATGGAGGCTACAAAGGCAGTAAAGCCAATTTTGGGTGAGTATTACCAGTTTGATGGGACTCCAATTTACAAGGCAATGTGGAGAGAGACAAAAGAGTGTATTTATGTTGACTCAGATGAAGATGCTCAAAGCAAAGGTGTTTTCTGGTACAAGAACAAGTTTTG 1082 0.4519 MGAGGRTSVPLAQRKAEADPLKRVPCTKPPFTLSQIKKAIPPHCFERSVVRSFSCVIYDLTIAAILFYVATHYFQHLSGPLSFLAWPIYWAFQGCILTGVWVIAHECGHHAFSDYQWLDNAVGLILHSCLLVPYFSWKYSHRRHHSNTGSLERDEVFVPKQKSGIRWYTKYLTNPPGRPYDRFACHYDPYGPIYSDRERLQIFISDAGIFAVSYGIYRLFVAKGLAWVICVYGVPLLVVNGFLVLITFLQHTHPALPHYDSTEWDWFRGALATVDRDYGILNKVFHNITDTHVVHHLFSTMPHYHAMEATKAVKPILGEYYQFDGTPIYKAMWRETKECIYVDSDEDAQSKGVFWYKNKF 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02249 360 PANTHER OMEGA-6 FATTY ACID DESATURASE, CHLOROPLASTIC 1 360 - -
Bva04g02249 360 PANTHER OLEATE HYDROXYLASE FAH12 1 360 - -
Bva04g02249 360 CDD Delta12-FADS-like 47 306 - -
Bva04g02249 360 Pfam Domain of unknown function (DUF3474) 25 63 IPR021863 GO:0016717
Bva04g02249 360 Pfam Fatty acid desaturase 85 322 IPR005804 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02249 Bva-Chr4 21385076 21389190 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02249 1 360 Lipid Metabolism Gene Families AT3G12120 70.235 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02249 K10256 - gmx:100805040 652.129
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02249 04 21385076 21389190 Bva13g02322 13 17724734 17728624 BWGD
Bva04g02249 04 21385076 21389190 Bva04g02249 04 21385076 21389190 ECH