Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02230 ATGACCGAATCAATTGAGCCATCTACATCTTCTTCATTGCCGTCTACAGCAGGGGACCCGAGCACTGTCATTCATCCAAGGCGCGAGCCTTTTGAGCATGGCCTATTGCCCATCCCAAAGCTCATCTTCTCCGACCCAACGCAAACCCTAATCCCCTTGAGGCAGAAGCTTCTTGAGCTTTCTTCCAATCAACAAGTCAATTCAGCGTCCATTGCCGAGGCCCTGCAGATCTCCATTGATCATGCTGGGCTTGTTCTCTCTACCCTCGCCTCTGTTCTACACTCCGAGTCCGATCCTCTAGTTACAGCCAAGCCAGGAGAATTGGACTCCGTCGGTGCTGATGTCCATGATCTGGTTTTATTCTTGTATATTCAATCTTACAAGAGGCTGCTACCTAGGACGCACAAGGACTCGGCTGCGGTGACTGATGTTTGGCCATCCACTTCGGCCTTTGATGGGTATTTGTCTGCTCTCTCGCCATTGCAGCTTGTACGTAGCAATAGTCGCAGATTTATGCCATCACAGGCTGATGAGGAGGCGCATCAGTTATCATATCTGCAAAAGCACATGGCTAACATTCTATCTCTTTTAGCAGAGCCTGTGGAGGGGGAAGGCGAAGAGTCTCTGgttttaaCTATGGATAGATTCGAGCACCTAGGATTTCTAATTCAGTTTGGCGATAAGGGATCTGAAGGAAATTCTTTGAGTCAAGCATCTCCTTTTTTTGCAAATTCGGATCCTGACATGCCAGCTGTTCCTGTTCCTGCCGCACAAGTTCTTGATTGGGTTCTTCAGAATATAGCTTCTGCTCTGGAAAATATTTCTGAAAGGATGGCTCCGAAGGAAAATGGGCCAGCCAATGCCTCTGATCAGGATGTTGCTATGGCTGATGCAAGCACTAGCTCAGTTAAGGCCTCAGCAAGTGCTAGGGGtccaatttttattgaagGGATCTCTAAATCATCATATGTGAAACATGCTTCTGACATTAAAGGTTCTTCTGTCAAGGTTTTAAATTGCCATGAGTCTGCTATCTACATCTTAGCACCTCTGAGATATGCCACTGTCTATGGATGCTCTGATGCTACAATTGTTCTAGGAGCAGTTGGCAAGGCTGTAAGAGTAGAACACTGTGAGCGAGCTCATGTGATTGTAGTGGCAAAACGTATTTGTATTGCTAATTGCCGTgaatgtgttttctttttgggagTGAATCAGCAACCTCTTATTGTTGGCGATAATCATAAGCTGCAGGTGGCACCTTACAATACGTTCTACCCCCAGCTGGAGGAGCACATGACTGAAGTCGGAATTTTGCCCACAGTAAACAGATGGGATGAAACTGTGGCATTGGGTGTGGTTGATCCTCATGATTCGTTATCTCATCCAGCAGGTGTATCAGATGTTCAAACTGAGTCTGCTGCACCTGTAGACCCGGATCAGTTAACAAATTTTGTGATTCCAAATTGGCTTGGGGGAGATTCCGCTGGGTCTACTAAAGACAACCCATTTACACTACCAGATGCTTATATAGCATCACAGGATAAAAATCAAACGAATTTAGGGGAAATAAGGCAACTCTTGCAGGAAGCACAACTTGAAGACAGTCGTAAACGAGAATTGTCATCTGCACTCCACGTGTACTTTAAGGACTGGTTATACGCGTCAGGAAACATCCGTCAACTTTACTGTCTACAGGGTGATTG 1706 0.4508 MTESIEPSTSSSLPSTAGDPSTVIHPRREPFEHGLLPIPKLIFSDPTQTLIPLRQKLLELSSNQQVNSASIAEALQISIDHAGLVLSTLASVLHSESDPLVTAKPGELDSVGADVHDLVLFLYIQSYKRLLPRTHKDSAAVTDVWPSTSAFDGYLSALSPLQLVRSNSRRFMPSQADEEAHQLSYLQKHMANILSLLAEPVEGEGEESLVLTMDRFEHLGFLIQFGDKGSEGNSLSQASPFFANSDPDMPAVPVPAAQVLDWVLQNIASALENISERMAPKENGPANASDQDVAMADASTSSVKASASARGPIFIEGISKSSYVKHASDIKGSSVKVLNCHESAIYILAPLRYATVYGCSDATIVLGAVGKAVRVEHCERAHVIVVAKRICIANCRECVFFLGVNQQPLIVGDNHKLQVAPYNTFYPQLEEHMTEVGILPTVNRWDETVALGVVDPHDSLSHPAGVSDVQTESAAPVDPDQLTNFVIPNWLGGDSAGSTKDNPFTLPDAYIASQDKNQTNLGEIRQLLQEAQLEDSRKRELSSALHVYFKDWLYASGNIRQLYCLQGD 568
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02230 568 Gene3D - 312 462 IPR016098 -
Bva04g02230 568 MobiDBLite consensus disorder prediction 1 19 - -
Bva04g02230 568 Pfam Tubulin binding cofactor C 332 447 IPR012945 -
Bva04g02230 568 PANTHER UNCHARACTERIZED 8 568 IPR039589 -
Bva04g02230 568 MobiDBLite consensus disorder prediction 1 26 - -
Bva04g02230 568 ProSiteProfiles C-CAP/cofactor C-like domain profile. 285 438 IPR017901 -
Bva04g02230 568 PANTHER BNAC04G02540D PROTEIN 8 568 - -
Bva04g02230 568 SMART carp 378 412 IPR006599 -
Bva04g02230 568 SMART carp 340 377 IPR006599 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02230 Bva-Chr4 21282322 21288575 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02230 K16810 - gmx:100801317 947.192
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02230 04 21282322 21288575 Bva04g02230 04 21282322 21288575 ECH