Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02205 ATGAGTCTCTCATCCCTCACGCTCGATTCCAGCACTTTCTCCTCCGCTCGATGCCCATTTAAATTTCAGCGGAGGCATCTTTCCCGCCGGAGCTTCTTCGTATGCTCTGCGAAGCCCGTTGTGTCCTCTCCTTCGAAGCTGAGCGTGGCTGATTCTTCCCGCTTCGATGGGTTAAGTCGAATCGATTCGCTGAGTCAGGTATCGGGTGTTTTGGGTTGCCAATGGGGTGATGAGGGAAAAGGTAAGCTGGTGGACATCTTAGCCAAGCACTTCGACATCGTTGCCCGCTGccagGGTGGAGCTAATGCTGGACATACCATTTATAATGCCGAAGGAAAAAAGTTTGCGCTTCATCTTGTTCCTTCAGGTATCCTCAACGAGGATACTCTCTGTGTCATTGGAAATGGGGTTGTTGTGCATCTGCCAGGGCTCTTTAAAGAAATTGACGAGCTAGAATCTAATGGGGTCCCTTGCAAGGGAAGGATATTGATATCTGATCGGGCTCATTTGTTGTTTGATTTCCACCAAGTGGTGGATGGGCTAAGAGAAGCTGAGCTTGCCAAATCTTTTATTGGCACTACCAAGAGAGGAATTGGACCTTGCTATTCCAGCAAGGTGATCCGTAATGGCATTAGGGTTGGTGATTTGAGGCACATGGATATTTTTCCTCATAAGCTTGATCTTTTGTTGTCAGACTTAGCATCAagatttaaagattttaactaTGGTCCAGACATGCTCAAGGAAGAAGTGGAAAAATACAAGAGATACGCTGAGAGATTGGAACCCTTTATTATTGATACTGTACATTTCATGAATGAAGCCATaactgaaaagaagaagattttgGTTGAAGGAGGTCAAGCAACGATGCTGGACATTGATTTTGGAACGTATCCCTTTGTGACTTCATCCAGCCCGTCAGCAGGGGGGATTTGTACTGGTCTTGGTATCGCTCCAAGAGTTGTCGGCGATCTAATTGGAGTGGTTAAAGCATACACTACAAGGGTTGGTTCTGGTCCTTTTCCGACAGAAATTCTGGGTCAAAGGGGTGATCTTCTTAGATTTGCTGGGCAAGAGTTTGGCACAACTACTGGCCGTCCTCGACGATGTGGTTGGCTTGATATAGTTGCATTAAGATACTGCAGTCAGATCAATGGCTTTTCGTCACTGAATCTCACTAAACTGGATGTTTTGTCTGATCTTGACGAAATTCAATTGGGTGTCTCCTACAAACATGTTGATGGTACACCAATCAAATCATTCCCCTCAGATCTCCGTCTTCTCGAGCAATTGAAGGTGGAATATGAAGTGCTTCCTGGGTGGAAGTCTGACATCTCTTCCATCAGAAACTATTCTGACCTTCCAAAAGCTGCACGCGAGTACGTGGAGAGGATAGAAGAACTTACTGGGGTGCCAATCCAATACATTGGTGTTGGGCCAGGACGTGATGCCCTGATATTCAAATA 1469 0.4486 MSLSSLTLDSSTFSSARCPFKFQRRHLSRRSFFVCSAKPVVSSPSKLSVADSSRFDGLSRIDSLSQVSGVLGCQWGDEGKGKLVDILAKHFDIVARCQGGANAGHTIYNAEGKKFALHLVPSGILNEDTLCVIGNGVVVHLPGLFKEIDELESNGVPCKGRILISDRAHLLFDFHQVVDGLREAELAKSFIGTTKRGIGPCYSSKVIRNGIRVGDLRHMDIFPHKLDLLLSDLASRFKDFNYGPDMLKEEVEKYKRYAERLEPFIIDTVHFMNEAITEKKKILVEGGQATMLDIDFGTYPFVTSSSPSAGGICTGLGIAPRVVGDLIGVVKAYTTRVGSGPFPTEILGQRGDLLRFAGQEFGTTTGRPRRCGWLDIVALRYCSQINGFSSLNLTKLDVLSDLDEIQLGVSYKHVDGTPIKSFPSDLRLLEQLKVEYEVLPGWKSDISSIRNYSDLPKAAREYVERIEELTGVPIQYIGVGPGRDALIFK 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02205 489 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 66 487 IPR027417 -
Bva04g02205 489 Gene3D Adenylosuccinate Synthetase, subunit A, domain 2 166 264 IPR042110 -
Bva04g02205 489 PANTHER ADENYLOSUCCINATE SYNTHETASE, CHLOROPLASTIC 15 489 - -
Bva04g02205 489 CDD AdSS 66 488 IPR001114 GO:0000166|GO:0004019|GO:0006164
Bva04g02205 489 TIGRFAM purA: adenylosuccinate synthase 70 487 IPR001114 GO:0000166|GO:0004019|GO:0006164
Bva04g02205 489 Hamap Adenylosuccinate synthetase [purA]. 1 489 IPR001114 GO:0000166|GO:0004019|GO:0006164
Bva04g02205 489 Gene3D Adenylosuccinate Synthetase, subunit A, domain 1 70 329 IPR042109 -
Bva04g02205 489 PANTHER ADENYLOSUCCINATE SYNTHETASE 15 489 IPR001114 GO:0000166|GO:0004019|GO:0006164
Bva04g02205 489 ProSitePatterns Adenylosuccinate synthetase active site. 197 208 IPR033128 -
Bva04g02205 489 Gene3D Adenylosuccinate Synthetase, subunit A, domain 3 330 489 IPR042111 -
Bva04g02205 489 SMART adenylsucc_synt 67 488 IPR001114 GO:0000166|GO:0004019|GO:0006164
Bva04g02205 489 ProSitePatterns Adenylosuccinate synthetase GTP-binding site. 74 81 IPR018220 GO:0005525
Bva04g02205 489 Pfam Adenylosuccinate synthetase 70 487 IPR001114 GO:0000166|GO:0004019|GO:0006164
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02205 Bva-Chr4 21128086 21130911 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02205 K01939 - twl:119995424 812.757
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02205 04 21128086 21130911 Bva04g02205 04 21128086 21130911 ECH