Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02178 ATGGCTTCTTTAGTATCTTCGCCATTTACATTATCCAATGCAAAGGCTGACCAGCTTTCTTCTCTTGCCCAAAagcatttctttcttcattccttcCTACCCAAGAAGATCAATTACACAAAATCCTGCGTGAGAGTGAAATGTGCTGCAATAGGCAACGGCCTCTTCACACAAACCACACCAGAAGTTCGTCGAATTGTCCctgagaaagaccaaaacttGCCAACAGTTAAATTTGTATATGTGGTGCTTGAAGCACAATACCAATCATCTATCACAGCTGCTGTTCAATCTCTCAAtagtaacaaaaaatatgCTTCATTTGAAGTTGTGGGTTACTTGGTAGAGGAGCTTCGCGATGAATCCACGTATAAAGTTTTCTGTAAGGATCTTGAAGATGCTAATGTCTTTATTGGGTCTCTGATTTTTGTAGAAGAGCTTGCTTTGAAGATTAAGGCTGCGGTGGAGAAAGAAAGGGACAGGCTTGATGCAGTTTTGGTGTTCCCATCAATGCCTGAAGTAATGAGGCTAAACAAGTTGGGTTCTTTCAGTATGTCGCAGCTTGGGCAATCAAAGAGCCCATTTTTCAAGCTATTCAAGGGGAAGAAGCAGTCAGCTGGGTTCGCCGACAGCATGTTGAAGCTTGTGAGGACACTGCCAAAGGTTTTGAAGTATTTACCAAGTGATAAAGCTCAGGATGCAAGGCTTTACATACTGAGTCTCCAGTATTGGCTTGGTGGATCGCCTGATAATTTGCAGAATTTCCTGAAAATGATTTCTGGGTCTTATGTTCCAGCTTTGAAAGCGACAAAGATCGAGTATTCGGAGCCAGTTTTGTACTTGGACAGTGGAATATGGCACCCTTTGGCTCCTTGTATGTATGATGATGTGAAGGAGTATTTGAACTGGTATGGAACAAGAAGGGATGCTGACGAGAAGCTCAAGAGTCCAAATGCACCTGTAATTGGGCTGGTTTTGCAGAGGAGCCATATTGTTACTGGGGATGAAAGTCACTATGTGGCTGTGATCATGGAATTAGAGGCAAGAGGGGCTAAAGTTATACCAATTTTTGCTGGTGGGCTTGACTTTTCAGGGCCAgttgagaaatattttattgatccCATTACTAAGAAATCATTTGTGAATTCAGTGGTTTCACTTACTGGTTTTGCTCTTGTTGGAGGCCCTGCAAGGCAGGATCATCCAAGGGCAGTTGAGGCTTTGAGGAGGCTTGATGTTCCTTACATTGTAGCTTTGCCTCTGGTGTTCCAAACAACAGAGGAGTGGCTCAACAGTACTCTGGGTTTGCATCCTATTCAGGTGGCTCTGCAAGTTGCTTTGCCAGAGCTAGATGGAGGCATGGAGCCCATTGTTTTTGCTGGTAGAGATCCCAGAACAGGAAAATCCCACGCTCTTCATAAGAGAGTGGAGCAACTTTGCACTAGAGCAATCAGATGGGCggaacttaaaagaaaatcaaagACAGGGAAGAAGCTGGCAATCACTGTCTTCAGCTTCCCTCCAGACAAAGGAAATGTAGGGACTGCTGCCTATCTCAATGTCTTCTCCTCCATCTTTTCTGTCCTAAAAGACATGCAAGGAGATGGTTACAATGTTGAAGGACTTCCAGAAACTTCAGAAGCTTTAATTGAAGAAATACTACACGACAAAGAGGCACAATTCAGCAGCCCAAATCTGAATGTTGCTTATAAAATGAGTGTACGTGAATATCAAAGGCTCACTCCCTATGCCACAGCATTAGAGGAAAACTGGGGGAAACCTCCGGGGAATCTGAACTCAGATGGAGAGAATCTATTGGTATATGGGAAACAGTATGGAAATGTGTTCATTGGAGTTCAGCCAACATTTGGATATGAAGGTGATCCCATGCGGCTTCTTTTCTCCAAATCTGCTAGTCCGCATCATGGATTTGCAGCATATTACTCTTTCGtagagaaaattttccaaGCTGATGCTGTTCTTCATTTTGGAACGCATGGTTCGCTCGAATTCATGCCTGGAAAGCAGGTGGGAATGAGTGATGTGTGTTACCCTGACAGTCTGATAGGAAATATCCCCAATATCTATTACTATGCTGCAAACAATCCCTCTGAGGCCACCATAGCCAAACGCAGGAGCTATGCAAATACCATTAGCTATCTAACTCCTCCAGCAGAAAATGCTGGACTTTACAAAGGCCTTAAGCAGCTAAGTGAACTCATCTCTTCATACCAGTCTTTGAAGGACACTGGACGCGGGCCACAAATTGTGAACTCAATTATCAGCACTGCTAGGCAATGTAACCTTGACAAGGATGTGGATTTGCCAGAAGAGGGTGAAGAAATCTCGGCCAAAGAACGAGACCTTGTGGTTGGAAAGGTATATTCCAAGATCATGGAGATTGAATCCCGTCTATTGCCTTGCGGGCTCCATGTCATTGGCGAACCTCCATCAGCATTGGAAGCAGTTGCTACACTGGTCAACATTGCTGCCCTTGATCGTCCTGAAGATGGGATTTTTTCACTCCCAGCAATACTGGCTGAGACTGTAGGAAGAGAAATAGAGGACGTTTACAGAGGGAGTGACAAAGGAATCTTGAAGGATGTAGAACTTATTCGGCAAATAACCGAAGCATCACGTGGAGCTATTACTGCTTTCGTGGAGCAAACTACTAACAAGAAAGGGCAAGTTGTTGATGTAGCGGATAAACTCAAATCCATCCTTGGATTTGGGATAAATGAGCCATGGGTTCAGTACTTTTCTAACACCAAATTCTACAGAGCTGATAGGCAGAAACTCAGAACATTGTTTGAGTTCTTGGGAGAGTGTTTAAAGTTGATTGTGGCTGACAATGAATTGGGAAGTCTTAAACAGGCTTTGGAGGGTAAATATGTGGAGCCAGGGCCTGGTGGTGACCCCATTAGAAATCCTAAAGTTTTGCCAACAGGAAAGAATATCCATGCCTTGGATCCACAAGCTATTCCAACAACAGCAGCAATGCAGAGTGCCAAAATAGTCGTGGATAGATTGATTGAGAGGCAGAAAGCTGATAATGGGGGAAAATATCCAGAGACAATTGCACTTGTGTTGTGGGGAACTGATAATATTAAGACTTATGGTGAATCCCTGGCTCAGGTCTTGTGGATGATTGGTGTGAGACCAGTGGCTGATACATTTGGACGAGTCAACCGGGTGGAACCGGTTAGTCTTGAAGAGCTCGGAAGGCCTAGGATTGATGTCGTTGTTAATTGCTCGGGAGTGTTCAGAGATCTGTTCATCAATCAGATGAATCTTCTGGACAGGGCAGTGAAGATGGTTGCTGAATTGGATGAACCAGCAGAGCAAAATTTTGTAAGGAAGCATGCATTAGAGCAAGCTCAGGCCCTTGGCATTGAAGTTCGAGAAGCAGCAACTAGAGTCTTCTCCAACGCCTCAGGATCCTACTCCTCAAACATAAACCTGGCTGTGGAGAATTCCACATGGAATGATGAGAAGCAGCTCCAGGACATGTACCTTAGCCGAAAGTCCTTTGCTTTTGATTGTGATGCCCCTGGTGCAGGCATGTccgaaaagagaaaagtttttGAGATGGCTTTGAGTACAGCTGACGCCACATTCCAGAACCTTGACTCATCAGAAATTTCCCTCACTGATGTCAGTCATTACTTTGACTCCGATCCAACTAATTTGGTACAGAATCTCAGGAAAGATGGAAAGAAGCCAAGTGCATACATTGCTGACACTACCACAGCTAATGCTCAGGTACGTACCCTTTCTGAGACTGTGCGGCTTGATGCAAGAACCAAGCTGTTGAATCCCAAGTGGTATGAAGGCATGCTGTCTAGTGGGTATGAGGGTGTTCGTGAAATTGAGAAGAGACTTACCAATACAGTAGGATGGAGTGCTACCTCAGGCCAAGTTGACAACTGGGTCTACGAAGAGGCCAACACAACCTTCATTCAAGATGAGGAAATGCTGAAGAAGCTCGTGAACACAAATCCAAACTCCTTTAGGAAGCTGGTGCAGACATTCTTGGAAGCCAATGGACGTGGGTATTGGGAGACTTCACAAGAAAACATTGAGAGGCTCCGACAATTGTATTCAGAAGTCGAAGACAAAATTGAAGGAATTGATCGCTG 4139 0.4325 MASLVSSPFTLSNAKADQLSSLAQKHFFLHSFLPKKINYTKSCVRVKCAAIGNGLFTQTTPEVRRIVPEKDQNLPTVKFVYVVLEAQYQSSITAAVQSLNSNKKYASFEVVGYLVEELRDESTYKVFCKDLEDANVFIGSLIFVEELALKIKAAVEKERDRLDAVLVFPSMPEVMRLNKLGSFSMSQLGQSKSPFFKLFKGKKQSAGFADSMLKLVRTLPKVLKYLPSDKAQDARLYILSLQYWLGGSPDNLQNFLKMISGSYVPALKATKIEYSEPVLYLDSGIWHPLAPCMYDDVKEYLNWYGTRRDADEKLKSPNAPVIGLVLQRSHIVTGDESHYVAVIMELEARGAKVIPIFAGGLDFSGPVEKYFIDPITKKSFVNSVVSLTGFALVGGPARQDHPRAVEALRRLDVPYIVALPLVFQTTEEWLNSTLGLHPIQVALQVALPELDGGMEPIVFAGRDPRTGKSHALHKRVEQLCTRAIRWAELKRKSKTGKKLAITVFSFPPDKGNVGTAAYLNVFSSIFSVLKDMQGDGYNVEGLPETSEALIEEILHDKEAQFSSPNLNVAYKMSVREYQRLTPYATALEENWGKPPGNLNSDGENLLVYGKQYGNVFIGVQPTFGYEGDPMRLLFSKSASPHHGFAAYYSFVEKIFQADAVLHFGTHGSLEFMPGKQVGMSDVCYPDSLIGNIPNIYYYAANNPSEATIAKRRSYANTISYLTPPAENAGLYKGLKQLSELISSYQSLKDTGRGPQIVNSIISTARQCNLDKDVDLPEEGEEISAKERDLVVGKVYSKIMEIESRLLPCGLHVIGEPPSALEAVATLVNIAALDRPEDGIFSLPAILAETVGREIEDVYRGSDKGILKDVELIRQITEASRGAITAFVEQTTNKKGQVVDVADKLKSILGFGINEPWVQYFSNTKFYRADRQKLRTLFEFLGECLKLIVADNELGSLKQALEGKYVEPGPGGDPIRNPKVLPTGKNIHALDPQAIPTTAAMQSAKIVVDRLIERQKADNGGKYPETIALVLWGTDNIKTYGESLAQVLWMIGVRPVADTFGRVNRVEPVSLEELGRPRIDVVVNCSGVFRDLFINQMNLLDRAVKMVAELDEPAEQNFVRKHALEQAQALGIEVREAATRVFSNASGSYSSNINLAVENSTWNDEKQLQDMYLSRKSFAFDCDAPGAGMSEKRKVFEMALSTADATFQNLDSSEISLTDVSHYFDSDPTNLVQNLRKDGKKPSAYIADTTTANAQVRTLSETVRLDARTKLLNPKWYEGMLSSGYEGVREIEKRLTNTVGWSATSGQVDNWVYEEANTTFIQDEEMLKKLVNTNPNSFRKLVQTFLEANGRGYWETSQENIERLRQLYSEVEDKIEGIDR 1379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02178 1379 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC 80 1378 IPR003672 GO:0009058
Bva04g02178 1379 CDD CobN_like 153 1250 IPR003672 GO:0009058
Bva04g02178 1379 Coils Coil 1353 1379 - -
Bva04g02178 1379 Pfam Domain of unknown function (DUF3479) 78 238 IPR022571 GO:0016851
Bva04g02178 1379 PANTHER MAGNESIUM-CHELATASE SUBUNIT CHLH, CHLOROPLASTIC 80 1378 - -
Bva04g02178 1379 Pfam CobN/Magnesium Chelatase 242 1359 IPR003672 GO:0009058
Bva04g02178 1379 TIGRFAM BchH: magnesium chelatase, H subunit 78 1377 IPR011771 GO:0015995|GO:0016851
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02178 Bva-Chr4 20987394 20992657 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02178 K03403 - gmx:100806079 2578.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02178 04 20987394 20992657 Bva13g02407 13 18200477 18206010 BWGD
Bva04g02178 04 20987394 20992657 Bva04g02178 04 20987394 20992657 ECH