Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02160 ATGTCCTCCAAGAAGGAAAACCTCCTCATTTTTACTCTCGTGATTCTTTGGTACTCCTCAAACATTGGCGTTATCCTTCTCAACAAGTATTTGCTCTCCAATTATGGATTCAAGTTTCCCATCTTCCTCACAATGTGTCATATGGCTGCCTGTGCCGTTCTCAGCTATGTTTCCATTGTTCTCCTCAAGATCACACCACACCAGATGATCAAATCCAGGCCCCAGTTCATCAAGATTGCAACTTTGAGCGTTGTTTTTTGTGGGTCTGTTGTGGGTGGCAACATCTCTCTCAGGTACCTCGCAGTTTCATTCAACCAAGCGGTGGGAGCAACGACGCCGTTTTTCACGGCGCTTTTCGCCTATATGGCAACCCTCAAGCGAGAAGCCTGGGTCACATATGCTGCTCTCGTTCCAGTAGTTGCTGGGGTTGTGATTGCAAGTGGgGGTGAACCTAGCTTTCATTTCTTTGGATTTATTATGTGCTTAAGCGCAACTGCTGCTAGGGCCTTCAAGTCTGTTCTTCAGGGcattttgctttcttctgAAGGGGAAAAGTTGAACTCAATGAATCTGCTCCTGTACATGTCTCCAATTGCAGTGCTAGTTTTGTTGCCTGCAGTGCTAATTATGGAGCCCGATGTCATGGATGTCACAATGTCCCTTGGAAGGGAACATAAATCTATGTggcttcttcttttgcttaaCTCATTCACAGCATATGCAGCTAACTTATCAAACTTCTTGGTGACTAAACATACCAGCGCTCTCACACTTCAGGTATTAGGGAATGCAAAGGGTGCTGTAGCTGTTGTTATCTCAATACTTCTGTTCAGAAACCCTGTCACTGTCGTTGGCATGGCTGGCTACACAATAACTGTACTTGGAGTAGCTGCATATGGAGAAACAAAGAGGAGGTTTAGGTG 923 0.4377 MSSKKENLLIFTLVILWYSSNIGVILLNKYLLSNYGFKFPIFLTMCHMAACAVLSYVSIVLLKITPHQMIKSRPQFIKIATLSVVFCGSVVGGNISLRYLAVSFNQAVGATTPFFTALFAYMATLKREAWVTYAALVPVVAGVVIASGGEPSFHFFGFIMCLSATAARAFKSVLQGILLSSEGEKLNSMNLLLYMSPIAVLVLLPAVLIMEPDVMDVTMSLGREHKSMWLLLLLNSFTAYAANLSNFLVTKHTSALTLQVLGNAKGAVAVVISILLFRNPVTVVGMAGYTITVLGVAAYGETKRRFR 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02160 307 Pfam Triose-phosphate Transporter family 11 299 IPR004853 -
Bva04g02160 307 SUPERFAMILY Multidrug resistance efflux transporter EmrE 196 298 - -
Bva04g02160 307 PANTHER SOLUTE CARRIER FAMILY 35 6 306 - -
Bva04g02160 307 PANTHER NUCLEOTIDE-SUGAR TRANSPORTER FAMILY PROTEIN-RELATED 6 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02160 Bva-Chr4 20878391 20881449 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02160 4 307 Organic Solute Cotransporters AT3G10290 81.579 0.0 515
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02160 - - gmx:100797956 518.079
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02160 04 20878391 20881449 Bva04g02160 04 20878391 20881449 ECH