Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02139 ATGGCTTTAGTCTCTGGAGGAAGATCAACTCTAAATCCCAATGCTCCTCTTTTCGTTCCTGCTGCCTTCCACCAAGTGGAAGATTTTTCTCCAGAATGGTGGCAACTGATAACAACGTTGACATGGTATCGTGACTACTGGGTCAGCCAGCATCAAGGTCTTTATGACAATGCTGAGGATGAATTTGATAGCAACGATGCTGTTGATTTCCTGCCAGATACATTTGATCTTGATGTTGATGAAGATTTTTCTAGTCTAGAAGCTCAGTTTGAGGAGTTTATTCAATCTTCTGAAACTGAAGcAGAAACTGGCCCCAACTCTTTTGTGGAACCAGAACATGGAGCAAAGCCACCAAGGTTAACTTCTGTAACTTTGTATAGGCCTGGCGTCAACTTGTACGCCATCTTGTTCATTCCATACCTCCCTTGCTTTGTCGAAATCTCCTACGGTGAACAAGGGGgaaaaaggtg 470 0.4255 MALVSGGRSTLNPNAPLFVPAAFHQVEDFSPEWWQLITTLTWYRDYWVSQHQGLYDNAEDEFDSNDAVDFLPDTFDLDVDEDFSSLEAQFEEFIQSSETEETGPNSFVEPEHGAKPPRLTSVTLYRPGVNLYAILFIPYLPCFVEISYGEQGGKR 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02139 155 Pfam Ataxin-2 C-terminal region 8 20 IPR009818 -
Bva04g02139 155 PANTHER OS05G0344200 PROTEIN 1 106 IPR040414 -
Bva04g02139 155 PANTHER PROTEIN EARLY RESPONSIVE TO DEHYDRATION 15 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02139 Bva-Chr4 20767483 20768969 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02139 - - qsu:112023271 173.711
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02139 04 20767483 20768969 Bva04g02139 04 20767483 20768969 ECH