Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02132 ATGAAGCTCATCAATATTAACCCCAAAAACCTCAGGCTCAGCCCCAAACGCTTCTTTCGCTCCAAGAAACAACGATCCACTGTATCTAGATCCGACCCGTCTTCTTTTAGTTCCGGTTCCGGAACCTCCTCGTCTTCCTCCGAGGAATCGAGTCACAAGACCGCTAGAACCCCCACCAGCGTCTTGCCCGATACTTCGGGCGACTGGTCTGATTACTCGCCTGATATTCAGTCTGAGTTGGCCCAAGTATTCAAGCTCATAGACCGAGATAATGATGGGATCATCTCGCGAGAAGAGCTCGAGGCTTTGTTGACTCGGCTCAGAGCTCAGCCGCTGACCCAGGAGGAGGTCACGATGATGCTCGGCGAGGTGGATCGTGATGGTCATGGCTGTATTAGCGTCGAGGCGCTCATGAGTCAGGTCGGGTCGGCTTGCGGGCCGGTCTGTGACTCGGATGACTTGAGAGAGGCGTTTGACGTTTTCGATACGGATCATGACGGGAGAATCTCGGCGGAGGAGCTCTTGCGGGTGTTCAAGGCCATAGGGGACGAGCGGTGCACGTTAGAGGAGTGTAGGCGCATGATAGAGGGTGTTGATAGAAACGGGGATGGGTTCGTGTGCTTCGAGGACTTCTCGCGTATGATGGAGCTGCAGCGATG 659 0.5478 MKLININPKNLRLSPKRFFRSKKQRSTVSRSDPSSFSSGSGTSSSSSEESSHKTARTPTSVLPDTSGDWSDYSPDIQSELAQVFKLIDRDNDGIISREELEALLTRLRAQPLTQEEVTMMLGEVDRDGHGCISVEALMSQVGSACGPVCDSDDLREAFDVFDTDHDGRISAEELLRVFKAIGDERCTLEECRRMIEGVDRNGDGFVCFEDFSRMMELQR 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02132 219 SUPERFAMILY EF-hand 73 216 IPR011992 -
Bva04g02132 219 Gene3D - 41 139 - -
Bva04g02132 219 ProSiteProfiles EF-hand calcium-binding domain profile. 186 219 IPR002048 GO:0005509
Bva04g02132 219 MobiDBLite consensus disorder prediction 1 69 - -
Bva04g02132 219 ProSitePatterns EF-hand calcium-binding domain. 162 174 IPR018247 -
Bva04g02132 219 PANTHER EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN 8 217 - -
Bva04g02132 219 MobiDBLite consensus disorder prediction 28 69 - -
Bva04g02132 219 ProSiteProfiles EF-hand calcium-binding domain profile. 75 110 IPR002048 GO:0005509
Bva04g02132 219 Pfam EF-hand domain pair 78 135 IPR002048 GO:0005509
Bva04g02132 219 Pfam EF-hand domain pair 153 215 IPR002048 GO:0005509
Bva04g02132 219 Gene3D - 140 219 - -
Bva04g02132 219 SMART efh_1 190 218 IPR002048 GO:0005509
Bva04g02132 219 SMART efh_1 116 144 IPR002048 GO:0005509
Bva04g02132 219 SMART efh_1 79 107 IPR002048 GO:0005509
Bva04g02132 219 SMART efh_1 153 181 IPR002048 GO:0005509
Bva04g02132 219 ProSiteProfiles EF-hand calcium-binding domain profile. 149 184 IPR002048 GO:0005509
Bva04g02132 219 PANTHER CALCIUM-BINDING PROTEIN CML35-RELATED 8 217 - -
Bva04g02132 219 ProSitePatterns EF-hand calcium-binding domain. 199 211 IPR018247 -
Bva04g02132 219 CDD EFh 153 215 IPR002048 GO:0005509
Bva04g02132 219 ProSitePatterns EF-hand calcium-binding domain. 88 100 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02132 Bva-Chr4 20736395 20737513 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02132 9 219 EF-hand Containing Proteins AT3G10190 54.167 1.40e-64 197
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02132 K13448 - jre:109008400 261.922
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02132 04 20736395 20737513 Bva04g02132 04 20736395 20737513 ECH