Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02104 ATGGATACTAACTCAGTAGCCAGTGTGCAGCAAAGAAAACCAACCAAAAGGAGGCAAAACAAGAATAAGCCCATAAAAGTAGTGTATATTTCCAATCCCATGAGGGTAGAGACAAGTGCTTCCAAGTTCAGAGCCTTAGTGCAAGAGCTCACCGGCCAATATGCTGAATTTCCCCCGGATCTTACTAGTGCTAAGTTCCAGCCGGACCTGGACCACAACAATAGTGACGATGGTAGTGACAGTGCCGGCGGCAGCGGCACTTTAGGCGGCTGTGGTGGTCATTTAACGGAATCTGAAAACTCAGTGTCGACAAAGATCGGTCATGATCATAATCACCGTACAGTTGGGATACATCAGGTCGGTCAAGAGCACGTGGAACGGTTTGAGCcattagatgatgttttcacACCTCAGATGATAGAGAGCTTTTCAGCTTTCTTGCCAGCGAGTGTCTTCTATGAATCTGCTCAACTTGATTCAGTGCTCTG 488 0.457 MDTNSVASVQQRKPTKRRQNKNKPIKVVYISNPMRVETSASKFRALVQELTGQYAEFPPDLTSAKFQPDLDHNNSDDGSDSAGGSGTLGGCGGHLTESENSVSTKIGHDHNHRTVGIHQVGQEHVERFEPLDDVFTPQMIESFSAFLPASVFYESAQLDSVL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02104 162 Pfam VQ motif 30 54 IPR008889 -
Bva04g02104 162 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 1 156 - -
Bva04g02104 162 PANTHER SIGMA FACTOR BINDING PROTEIN 1, CHLOROPLASTIC 1 156 IPR039335 GO:0051091
Bva04g02104 162 MobiDBLite consensus disorder prediction 1 25 - -
Bva04g02104 162 MobiDBLite consensus disorder prediction 58 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02104 Bva-Chr4 20522845 20523717 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02104 - - aip:107647936 117.087