Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02096 ATGCTTTACTTCCTAATATCCTTTCTCTCCATTGTCATCTTTTCTAAGTCCTTCACCAGTAACTCAGTCCCTGCAGGGGAGAGTGGGACAAAACCAGTGTCAACTGGGTTTTGGCCCTTTTGgggaaaattttcaagcttCCTTTTTTCTCGAATAATTAGGAAAAGCAGCATTGCTTCTGATTTTTTTCAGCTTCCTCTAACCATGGCATTTAAAAAGAGGAATTTGATATCTAAAGTGGAGAATGAGGAAGAGGAAGGCAAAGTTTCTCTCTTGGATTTGCCTGATTTGACTTTGGAGTGTATCCTTGAACACCTTTCACCGGCTGAATTGTGCAACACGGCAGCGGTGTGCACGTATCTTAGAAATAAATGTCGAAGTGATTATGTATGGGAGAAGCACATGAAGCGGAAATGGGGTAAAGTGATTGGTGATTCTGCTTATAGACAATGGCGATGGCATATAGCTTCCAGAGAAAGCGACAAAACCTTCAATCAAGGCAATCACAAAGGAATATACTCTTCCCTTCATAATTTCTGGCTTTTTTTATGGATTAAGTCAAGATCACAAAATTCTGGGCGATCAAAGAGCTCACCACCAGAAGATTCATTGATGGCTTTATATCTTTCTCTTGAGAGCGGAAAGTTTTTGTTCCCAGCTCAAGTCTATAATCGGGAGAATGGCCATGCTGGGTTCATGCTCTCATGTTATGATGCACAAATTTGCTATGACTCCAGAACTGACACCTTTCAGGCAAGGTACTCGCCTCATGGAAGATGGGCAATTGAAGAAGATATACAATGGGACAGGCTGAGAGTGCCACCGATTGACATTTCTCCACAACTTCTTCATACTTCTGATTGTTTAGATGACTTGAGACCTGGGGATCATATTGAGATCCAGTggagaagaaacaaagaattcCCTTATGGTTGGTGGTATGGCGTCGTTGGTCACTTGGAATCATGTCAAGCAAATGTGAATCATTGCCATTGTCGCTGTAGTGATACAGTGATTTTGGAGTTCAAGCAATACACCTCTGGGTCGCGATGGAGGCAAACGGTGATAAACAGGAAGCTTCATAGAGAAGAAGGCGATGAAATAGATGGCTTTTATGGGGGAATCAGGAAGCTACACAACGAGGATGAAATTACGAGGTGGAAGAAACTATGGCCAACCAAAATTGTGGAATA 1193 0.4099 MLYFLISFLSIVIFSKSFTSNSVPAGESGTKPVSTGFWPFWGKFSSFLFSRIIRKSSIASDFFQLPLTMAFKKRNLISKVENEEEEGKVSLLDLPDLTLECILEHLSPAELCNTAAVCTYLRNKCRSDYVWEKHMKRKWGKVIGDSAYRQWRWHIASRESDKTFNQGNHKGIYSSLHNFWLFLWIKSRSQNSGRSKSSPPEDSLMALYLSLESGKFLFPAQVYNRENGHAGFMLSCYDAQICYDSRTDTFQARYSPHGRWAIEEDIQWDRLRVPPIDISPQLLHTSDCLDDLRPGDHIEIQWRRNKEFPYGWWYGVVGHLESCQANVNHCHCRCSDTVILEFKQYTSGSRWRQTVINRKLHREEGDEIDGFYGGIRKLHNEDEITRWKKLWPTKIVE 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02096 397 PANTHER ESTS AU081301(E20138) 1 397 - -
Bva04g02096 397 SUPERFAMILY F-box domain 83 142 IPR036047 GO:0005515
Bva04g02096 397 PANTHER F-BOX-LIKE PROTEIN 1 397 - -
Bva04g02096 397 SMART fbox_2 94 134 IPR001810 GO:0005515
Bva04g02096 397 ProSiteProfiles F-box domain profile. 88 134 IPR001810 GO:0005515
Bva04g02096 397 Pfam F-box domain 91 132 IPR001810 GO:0005515
Bva04g02096 397 Gene3D - 74 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02096 Bva-Chr4 20479328 20481963 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02096 - - gmx:100778469 595.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02096 04 20479328 20481963 Bva04g02096 04 20479328 20481963 ECH