Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02091 ATGAATACGTATGCTGAAAGGCCAACTAATGGGgaagttgaagaagatgatgatgaagatgaagtaACTGGTAATGGTCGTGCCTGGGAAAGAACTTATGCAGAAGATAGATCATGGGAGTCTTTGCAAGAAGATGAATCTGGGCTTCTTCGCCCCATTGATGATAAGGCCATTTACCATTCCCAGTATCGCAGGCGCCTTCGTGCCCTTGCTTCCACTGCAGCAGTTTCTCGAATTCAAAAGGGTCTCATACGCTACCTATACGTTGTTGTTGACCTGTCCAAGGCAGCTTCAGAGACAGACTTTCGACCAAGTAGGAGGGCTGTGGTTGGGAAACAAGTTGAGGCTTTTATCAGGGAGTTCTTCGATCAGAATCCACTTAGTCATATAGGTTTGGCGACCATTAAAGATGGTATCGCATATAGCTTAACGGAACTTGGTGGCAGTCCTGAGTCTCACATTAAAGCTTTGATGGGTAAACTGGAATGCTCTGGTGACGCCTCCCTACAAAATGCACTGGAGCTTGTTCATGGCTATCTAAACCAAATTCCATCATATGGTCATCGTGAAGTTCTGCTCTTGTATTCAGCTCTTAGTACATGTGATCCTGGTGATATCATGGAAACCATCCAAAAATGcaaaaaggataaaataagGTGCTCTGTCATTGGTCTTGCTGCTGAAATGTTTATATGCAAACATCTCTGCCAAGAAACTGGTGGAACGTACACTATTGCATTGGACGAGGCCCACTTTAAAGAGTTGATTCTAGAGCACGCACCCCCACCCCCATCAATAGCAGAGTATGCCACTGCCAATTTAATCAAGATGGGTTTTCCACAAAGAGCAGCTGAGGGCTCCATTGCAATTTGTACATGTCATGAAGAAGCTAAGGTGGGAGGGGGGTACACTTGTCCACGATGCAAAGTGCGTGTCTGTGAGCTTCCCACTGAATGTCGTATCTGCGGATTGACCCTTATTTCTTCACCTCATTTAGCAAGGTCATATCATCATCTCTTTCCAGTAGTTCCCTTTGATGAGGTGCCACCATCAGTTCAAAATGACCCAATTCGTAGATCACCCAGCACTTGTTTTGGTTGTCAACAGAGTCTTCTTAATCCTGGAAACAAGCCTGGACTTTCTGTCACTTGCCCAAAATGCAAACAGTATTTCTGTATCGATTGTGACATCTACATTCATGAGAGCTTACATAACTGCCCAGGCTGCGAGAGTTTCAGGCATTCCAAGGCAGAATG 1256 0.4355 MNTYAERPTNGEVEEDDDEDEVTGNGRAWERTYAEDRSWESLQEDESGLLRPIDDKAIYHSQYRRRLRALASTAAVSRIQKGLIRYLYVVVDLSKAASETDFRPSRRAVVGKQVEAFIREFFDQNPLSHIGLATIKDGIAYSLTELGGSPESHIKALMGKLECSGDASLQNALELVHGYLNQIPSYGHREVLLLYSALSTCDPGDIMETIQKCKKDKIRCSVIGLAAEMFICKHLCQETGGTYTIALDEAHFKELILEHAPPPPSIAEYATANLIKMGFPQRAAEGSIAICTCHEEAKVGGGYTCPRCKVRVCELPTECRICGLTLISSPHLARSYHHLFPVVPFDEVPPSVQNDPIRRSPSTCFGCQQSLLNPGNKPGLSVTCPKCKQYFCIDCDIYIHESLHNCPGCESFRHSKAE 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02091 418 SMART VWA_4 84 260 IPR002035 -
Bva04g02091 418 Pfam TFIIH C1-like domain 363 411 IPR004595 GO:0006281|GO:0008270
Bva04g02091 418 Gene3D von Willebrand factor, type A domain 80 265 IPR036465 -
Bva04g02091 418 SUPERFAMILY vWA-like 82 250 IPR036465 -
Bva04g02091 418 SMART C1_4_2 363 411 IPR004595 GO:0006281|GO:0008270
Bva04g02091 418 PANTHER GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2 19 409 - -
Bva04g02091 418 Pfam Ssl1-like 90 280 IPR007198 -
Bva04g02091 418 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 340 417 IPR013083 -
Bva04g02091 418 SUPERFAMILY Cysteine-rich domain 337 410 IPR046349 -
Bva04g02091 418 MobiDBLite consensus disorder prediction 1 27 - -
Bva04g02091 418 ProSitePatterns Zinc finger C2H2 type domain signature. 384 404 IPR013087 -
Bva04g02091 418 TIGRFAM ssl1: transcription factor ssl1 302 411 IPR012170 GO:0000439|GO:0006289|GO:0006351
Bva04g02091 418 CDD vWA_transcription_factor_IIH_type 82 264 IPR007198 -
Bva04g02091 418 PIRSF TFIIH_SSL1 2 412 IPR012170 GO:0000439|GO:0006289|GO:0006351
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02091 K03142 - gmx:100803090 739.184