Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02089 atgataacGCTTTCAGACTTGTACCATGTTCTCACGGCCGTTGTGCCTCTTTACGTGGCCATGATCTTAGCTTATGGCTCTGTGAAGTGGTGGAAAATCTTCAGCCCTGATCAGTGTTCAGGCATCAATCGATTTGTTGCTCTCTTTGCAGTTCCATTGCTTTCCTTCCACTTTATATCCACCAACAATCCCTATGCCATGAACTACAGGTTCATAGCTGCTGATACCTTGCAAAAAGTTATCGTTTTGGTAGTCTTAGCAATATGGTCAAGGACCAGCTCAAGAGGGTGCCTTGAGTGGGCCATtaccattttctctctttccactCTTCCAAACACCCTGGTCATGGGTATCCCATTGCTGAAGGGTATGTACGGAGAATCCTCGGGCACCCTGATGGTTCAAATAGTGGTTCTTCAGTGTATAATATGGTACACCTTGATGCTGTTTCTGTTTGAGTACAGGGGAGCCAGGCTTCTGATTGTTGAGCAGTTCCCAGACACTGCTGGCTCTATTATctccttcaaagttgattctGATATCATTTCCTTGGACGGGAAAGAGCCTTTGCAGACTGAAGCAGAGGTTGGTGAAGATGGAAAGCTCCATGTTACAGTGAGAAAATCTACCAGTTCACGCTCTGAAATCTTCTCTCGCCGTTCCCATGGTCCAAATTCCGGTGTTTCCTTGACTCCACGTCCATCAAATTTGACCAATGCAGAGATTTACTCCTTGCAATCATCCAGAAACCCAACGCCTAGGGGCTCGAGCTTCAATCATTCTGATTTTTTCTCAATGGTTAATGGGAAAAACACGAGTGGTGTGAGCCCAAGGACTTCTAATTTCGGAAGCTTGGCTTTCGATGAGGAGAGTGGAGTCAGCGCTTATAGTAACCCATCTAAAGCCAACGGGGTGTTGTCACAGGGAAGTGGCTATCCGGCACCACCAAATGCCGGTATCTTCTCTCCGATGAGCGGTCCCGGAGTGAAGAAGAAGGCCAATGGAGCTGATGGTGGGAAAGATCTTCACATGTTTGTTTGGAGTTCAAGCGCTTCGCCGGTCTCCGAAGGTGGAATCCACGTCTTCAGAGGTGGGGACTACGGTAACGAGTTTAGTGGGGTAGCTCACCAGAAAGATTATGATGAATTTGGTCGAGATGAGTTTAGCTTCGGAAACAGAACTGTTACTAATGGAGTTGACAAGGAGGGGCCGGTGCTTTCTAAGCTTGGTTCCAGCTCTACAGCTGAGCTCCACCCAAAAACTGAAGCTCAAGGTGAACCTAAACCAACGTCAATGCCACCTACTAGTGTGATGACCAGACTCATCTTAATAATGGTGTGGCGAAAGCTGATCAGGAATCCCAATACTTACTCCAGCCTTTTTGGCCTCACTTGGTCTCTCGTCTCATTCAAGTGGAATGTGACAATGCCCGCCATTGTTGCCAAATCAATCTCGATTTTATCTGATGCTGGCCTGGGGATGGCCATGTTTAGCCTTGGCTTGTTCATGGCATTGCAACCAAGGATCATAGCATGTGGAAACTCAATTGCTACCTTTGCCATGGCGGTTAGATTCCTCACTGGCCCAGCTGTCATGGCTGCTGCTTCAATCGCTGTTGGACTAAGGGGAGTTCTTTTGCACATTGCAATTGTACAAGCTGCTCTTCCTCAAGGGATTGTCCCTTTTGTATTTGCTAAGGAATATAATGTTCATCCTGACATACTAAGCACTGGGGTTATATTTGGGATGCTAATTGCTCTCCCTATAACATTAGTTTACTACATCTTGCTGGGGCTTTG 1799 0.4569 MITLSDLYHVLTAVVPLYVAMILAYGSVKWWKIFSPDQCSGINRFVALFAVPLLSFHFISTNNPYAMNYRFIAADTLQKVIVLVVLAIWSRTSSRGCLEWAITIFSLSTLPNTLVMGIPLLKGMYGESSGTLMVQIVVLQCIIWYTLMLFLFEYRGARLLIVEQFPDTAGSIISFKVDSDIISLDGKEPLQTEAEVGEDGKLHVTVRKSTSSRSEIFSRRSHGPNSGVSLTPRPSNLTNAEIYSLQSSRNPTPRGSSFNHSDFFSMVNGKNTSGVSPRTSNFGSLAFDEESGVSAYSNPSKANGVLSQGSGYPAPPNAGIFSPMSGPGVKKKANGADGGKDLHMFVWSSSASPVSEGGIHVFRGGDYGNEFSGVAHQKDYDEFGRDEFSFGNRTVTNGVDKEGPVLSKLGSSSTAELHPKTEAQGEPKPTSMPPTSVMTRLILIMVWRKLIRNPNTYSSLFGLTWSLVSFKWNVTMPAIVAKSISILSDAGLGMAMFSLGLFMALQPRIIACGNSIATFAMAVRFLTGPAVMAAASIAVGLRGVLLHIAIVQAALPQGIVPFVFAKEYNVHPDILSTGVIFGMLIALPITLVYYILLGL 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02089 599 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1 599 - -
Bva04g02089 599 MobiDBLite consensus disorder prediction 401 433 - -
Bva04g02089 599 Pfam Membrane transport protein 9 594 IPR004776 GO:0016021|GO:0055085
Bva04g02089 599 MobiDBLite consensus disorder prediction 213 235 - -
Bva04g02089 599 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 599 - -
Bva04g02089 599 TIGRFAM 2a69: auxin efflux carrier 1 599 IPR014024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02089 Bva-Chr4 20437992 20440797 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02089 1 590 Organic Solute Cotransporters AT1G73590 64.396 0.0 752
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02089 K13947 - vvi:100263725 1088.94
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02089 04 20437992 20440797 Bva04g02089 04 20437992 20440797 ECH