Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02082 ATGACAAAGATAAGTCCTGAAGTTGAAGTCAAGATACCAGTGGAAGCAATTCTGCTAGTTTCGGCAGATGTGAGCTTTGCTTCTAATAGCTTTCCCAAGTATAAACTTGGAGCTGATAATCAAATTCTGGAGGAGCCAACGGAGGATAATCTGGGACCTTCGTTGAAGGAGGTTATTGAACAAGAAGCTTCCCACTTGTCAGATCAGCACAAGCGTCTCTCAGTTCGTGACCTTGCCTGTAGATTCGATAAGAACTTCGCTTCAGCTGCGAAGTTGTCCAATGAGGCAAAGTTAATTGAGGTGGCATCTTTGGAGGGACATGTTCTTTTGAAAAAGCTAAGAGATGCATTAGAATCTCTAAGAGGTCGTTTGACTGGAAAAAATAAGGAGGATGTGGAGAAAGCTATCTCTATGgTGGAAGCTTTAGCTGTTAAGTTGACTCAAAATGAAGGAGAATTGATTCAAGAGAAGTTTGAAGTCAAGAAGCTCCTGAATTTTCTTAAACAGACTTCTGAAGATGCTAAAAAGTTGGTTAATCAAGAGAAGTCTTTTGCATGTGCTGAAATTGAGAGTGCTAGAGCAGTGGTTTTGAGAATTGGGGAGGCCCTTGAGGAACAAGAGAAAGCTTCCCAAGCGTCAAAAAATCAgGATGTGGATGAACTAGTTGAAGAGGTTCAAGAGGCAAGAAGAATCAAGTTGTTGCATCAGCCAAGCAAGGTGATGGCCATGGAATATGAACTTCGTGCTCTAAGAGATCAAATTCGAGAGAAATCTATATTTTCTGTTAAACTACAGAAAGAGCTAACAATGAGCAAGTGGGATGCAGAGAACAAATCTTGTTCGTATAAACTGGGTGGTTCTACAACTTTAGGTTCGTACCTCAGAGTTCAGCCTCGTTCAGATGATGTTCCTCAGCTTTCTAAATGTTCGTTTCAGTGGTATCGATTGTCATCTGAGGGCAGCTGGAGGGAACCGATTTCAGGTGCCAACGAATCAATATATGCTCCAGATCCCCTCGATGTTGGTCGAATCTTACAAGTAGACATTGTCTCCAATGGCCAAAAACTTACTGTAACAACCACTGGTCCCATTCAACCTGTTTCTGGACTAGGAAGTCATGTGGAGATGCTTCAACGAAAATCAAATACAGAATTTAATGTAGTTATCTCTCAGATGAATGGACAAAATCACTCATCGCATTCTGTTCATGCATTTCATGTTGGGAGAATGAGGATAAAGCTCTGTAGAGGTTGGATTACAAAAGCGAGGGAAATTTACTCCCCATCAATGCAGCTATGTGGAGTCAGAAGTGATGCCAGTATTGCAGCAAAGGCATTATTTTGGCAAGCAAGAAAGGGGCTTTCTTTTGTATTAACATTTGAATCAGAGCGAGAAAGGAATGCAGCCATCATGCTTGCCAGGAAATATGCTCTTGATTGCAACGTGGTGCTTGCTGGGCCAGATGATCTAGTTTA 1475 0.4156 MTKISPEVEVKIPVEAILLVSADVSFASNSFPKYKLGADNQILEEPTEDNLGPSLKEVIEQEASHLSDQHKRLSVRDLACRFDKNFASAAKLSNEAKLIEVASLEGHVLLKKLRDALESLRGRLTGKNKEDVEKAISMVEALAVKLTQNEGELIQEKFEVKKLLNFLKQTSEDAKKLVNQEKSFACAEIESARAVVLRIGEALEEQEKASQASKNQDVDELVEEVQEARRIKLLHQPSKVMAMEYELRALRDQIREKSIFSVKLQKELTMSKWDAENKSCSYKLGGSTTLGSYLRVQPRSDDVPQLSKCSFQWYRLSSEGSWREPISGANESIYAPDPLDVGRILQVDIVSNGQKLTVTTTGPIQPVSGLGSHVEMLQRKSNTEFNVVISQMNGQNHSSHSVHAFHVGRMRIKLCRGWITKAREIYSPSMQLCGVRSDASIAAKALFWQARKGLSFVLTFESERERNAAIMLARKYALDCNVVLAGPDDLV 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02082 491 Gene3D - 269 366 - -
Bva04g02082 491 Gene3D - 101 152 - -
Bva04g02082 491 Pfam Actin-binding domain of plant-specific actin-binding protein 55 97 IPR032012 GO:0003779
Bva04g02082 491 PANTHER STOMATAL CLOSURE-RELATED ACTIN-BINDING PROTEIN 3 1 489 - -
Bva04g02082 491 Coils Coil 110 130 - -
Bva04g02082 491 Pfam Ig domain of plant-specific actin-binding protein 282 379 - -
Bva04g02082 491 Pfam Coiled-coil regions of plant-specific actin-binding protein 101 268 IPR032009 -
Bva04g02082 491 Gene3D - 367 491 - -
Bva04g02082 491 Coils Coil 211 231 - -
Bva04g02082 491 Pfam PH domain of plant-specific actin-binding protein 382 489 IPR041144 -
Bva04g02082 491 PANTHER STOMATAL CLOSURE-RELATED ACTIN-BINDING PROTEIN 1 1 489 IPR039640 GO:0003779|GO:0007015|GO:0010119
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02082 Bva-Chr4 20383209 20389000 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02082 - - gmx:100816432 814.683
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02082 04 20383209 20389000 Bva04g02082 04 20383209 20389000 ECH