Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02079 ATGGATTCTTCGTCTGCTTCCAACGATGCCTCTTCTGGGTTCAAAGACAAGGAGTCAATGATTGACCCCTTCTTGGTTGACGCTCTACAGAACTCTCGTCATCGCCTTACCATTTTGCGTATGGAACTCGACATCCAGAGGTTTCTGAACAATGTGGATGAGCAGCACTTCGAGTTTCAacatttctcttcttcctatCTCCGACTGGCAGCTCATCGTGTTGCTCAGCACTATGGCATGCAAACACTGGTACAAGATAATGGCTTAGACGGCCAGGGAAGTAAAATTGTGGTGAGAAAGTTAGCAGAAAGCAGATATCCTGTGGTTTGCCTATCTGAAATACCAGCCAAACAGTTGGAAAATGATAATGCTCAGctgaaaaaaattgtcatcAGGCCTAGGCCTAATAAAACCACAGTAAATGAAGCTAATGAAGCAGGGATGAAAGGAAATATTGTGAGAAGTGTGGAAGAGAGGAAGGAGGAATATGATAGGGCACGGGCACGCATATTTAGGAGCTCTCAGAATCTTGATTCAGGTGATCCATCCTCCCAGGTCCTAATGGATGAGAGAAATTTTTGTACGAGTAAGGATGAGAATGAAGCTAGCAAGAGCTCCATGGTTGATCCAGAAAAGCATACTAGTGTCAGCGATGTTGGTTCTAATAGAGTTGCTATTTTCAGGGATAGGGAAAAGGATCGTAGTGATCCAGATTATGACCGTAGCTATGGAAGGTATGTGAGGTGTATTCCAGCTTCTGCCCTAAACTTGGCGCCATTTCATGTGCATAAAGTTCAGCCTCCATTTGCTCAATATGACACTGCATTTAATCAGCTGGGTCAGATGTCACAAACTCAAGCCTCAGTTGGCTATGGACCCCCTTCGGGCCCGATTATGAGTCCGTTTTGTGCCACAGGATTGAATCAGACATCTAGAGATGCTGCTTATCTGCAGTGGCCAAGTGCTGCCATGATGTATGCGCATTCATATGATCAACTAAGACATGCTGTATTCCAGGCTCCGTTTGGTCAACAGCCACTGAGTTTTGACTATTCTCAGAATTACTA 1067 0.4349 MDSSSASNDASSGFKDKESMIDPFLVDALQNSRHRLTILRMELDIQRFLNNVDEQHFEFQHFSSSYLRLAAHRVAQHYGMQTLVQDNGLDGQGSKIVVRKLAESRYPVVCLSEIPAKQLENDNAQLKKIVIRPRPNKTTVNEANEAGMKGNIVRSVEERKEEYDRARARIFRSSQNLDSGDPSSQVLMDERNFCTSKDENEASKSSMVDPEKHTSVSDVGSNRVAIFRDREKDRSDPDYDRSYGRYVRCIPASALNLAPFHVHKVQPPFAQYDTAFNQLGQMSQTQASVGYGPPSGPIMSPFCATGLNQTSRDAAYLQWPSAAMMYAHSYDQLRHAVFQAPFGQQPLSFDYSQNY 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02079 355 CDD R3H_encore_like 34 100 - -
Bva04g02079 355 Pfam SUZ domain 127 174 IPR024771 -
Bva04g02079 355 ProSiteProfiles SUZ domain profile. 105 175 IPR024771 -
Bva04g02079 355 Gene3D - 10 135 IPR036867 GO:0003676
Bva04g02079 355 PANTHER OS05G0411600 PROTEIN 3 354 - -
Bva04g02079 355 ProSiteProfiles R3H domain profile. 35 102 IPR001374 GO:0003676
Bva04g02079 355 MobiDBLite consensus disorder prediction 198 217 - -
Bva04g02079 355 PANTHER CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN 3 354 - -
Bva04g02079 355 SUPERFAMILY R3H domain 9 135 IPR036867 GO:0003676
Bva04g02079 355 SMART R3H_4 19 101 IPR001374 GO:0003676
Bva04g02079 355 Pfam R3H domain 37 98 IPR001374 GO:0003676
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02079 Bva-Chr4 20357830 20361771 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02079 - - gmx:100814835 553.132
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02079 04 20357830 20361771 Bva04g02079 04 20357830 20361771 ECH