Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02077 ATGGAGTTAGAGAAAAGCTCTACGGCGACGGGCGAGATTCTGCAGAAACACGGGGAGCAAGACGAGACCATTAGCAGcagcaagaagaagaagaagcagcatCGACGAGGAGGCGTCAGAACATTACCTTTCATCCTTGCAAATGAAGTGTGCGATCGATTTGCCAGTGGTGGGTTCCATGTGAACTTGATAAGTTACTTGACCCTAGAGCTGAACCTGCCAATGGTATCAGCCTCCAACACTTTGAGCAACTTCGCCGGAACATCTAGCTTCACTCCACTTATTGGTGCTATCATTGCTGACTCATTTGCTGGCCGCTTTTGGACCATTACTGCTGGTTGTCTCATCTCCGAACTGGGATTAGTAAGTATCACTGTATCAGCAATACTGCCAAGGCTGCGTCCCCCACCATGCCCAACTCAAAAGAACTGCATACAAGCCTCATCTTCCCAGCTATGGGTACTCTATGCGTCTCTTCTCCTGACATCTATGGGGTCAGGAGGCATAAGGCCCTGTGTTGTGCCATTCTCTGCAGATCAAATCGACATGTCCAAAAATGCTATAGCTGCTAGGAAGTGGAACATCTTTAATTGGTACTTTTTTGCCATGGGAATTGCTTCGTTAATTGCTTCGACCGTTGTCGTTTATATTCAAGATCGCTTGAGTTGGAGCTGGGGCTTTGGCATCCCAACCGTTGCCATGTTCATTTCTGTCTTAGTTTTTGTCATAGGTTCACCATTCTATAATAAGGTTAAACCAGAGGGGAGTCCTCTGGTTCGTTTGGCACAAGTTATTGTTGCGGCTTTTAAGAAGAGGAAGGAGGTTCTCCCTCATGACCCCAACCTCTTGTATCAAAATAAGCAGCTTGATACAGCTATTTCTCTGCAAGGAACCCTTTTGCACTCTGATCAATACAAATGGTTAGATAAAGCTGCAATAGTGACAGAGGAGGAAACCAGAGATCAAAGTGCAGCACCAAATTTATGGAGATTAGCCACTGTCCATAGAGTTGAGGAGCTAAAATGCATCATTAGAATGCTACCAATATGGGCATCGGGGATATTGTTCTCACCAGAGAGTCTGAGAAGCAGTGCTGCAGCTCTTTCTCACATAACCACAGCCATTGGCAGCTATGTCGGCACTCTGCTGGTAACATTAGTTCATAAATATACTGGGAAGCATGGGAATGATTGGCTTCCCGATTGGAATCTCAACAGGGGGAAATTGGACTACTATTACTATCTTGTTGCTGGGATTCAAGTCATAAATCTTGtctattatttcttatgtGCTTGGTTTTACAATTACAAGCCATTGGAAGAAATCAGCGAAATGAACAGGGAATTACAAGATGTGGAAAAGGCTAATGATGATAAAATCCCATCTGACAAGTTAAATGATGGTAAGGAGGGGGAAGATAGAAAACTTGCCAAGGATGATTA 1442 0.4334 MELEKSSTATGEILQKHGEQDETISSSKKKKKQHRRGGVRTLPFILANEVCDRFASGGFHVNLISYLTLELNLPMVSASNTLSNFAGTSSFTPLIGAIIADSFAGRFWTITAGCLISELGLVSITVSAILPRLRPPPCPTQKNCIQASSSQLWVLYASLLLTSMGSGGIRPCVVPFSADQIDMSKNAIAARKWNIFNWYFFAMGIASLIASTVVVYIQDRLSWSWGFGIPTVAMFISVLVFVIGSPFYNKVKPEGSPLVRLAQVIVAAFKKRKEVLPHDPNLLYQNKQLDTAISLQGTLLHSDQYKWLDKAAIVTEEETRDQSAAPNLWRLATVHRVEELKCIIRMLPIWASGILFSPESLRSSAAALSHITTAIGSYVGTLLVTLVHKYTGKHGNDWLPDWNLNRGKLDYYYYLVAGIQVINLVYYFLCAWFYNYKPLEEISEMNRELQDVEKANDDKIPSDKLNDGKEGEDRKLAKDD 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02077 480 MobiDBLite consensus disorder prediction 1 35 - -
Bva04g02077 480 PANTHER NITRATE TRANSPORTER 1 24 356 - -
Bva04g02077 480 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 24 356 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva04g02077 480 PANTHER OLIGOPEPTIDE TRANSPORTER-RELATED 357 448 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva04g02077 480 SUPERFAMILY MFS general substrate transporter 27 246 IPR036259 -
Bva04g02077 480 Gene3D MFS general substrate transporter like domains 13 356 IPR036259 -
Bva04g02077 480 Pfam POT family 107 357 IPR000109 GO:0016020|GO:0022857|GO:0055085
Bva04g02077 480 MobiDBLite consensus disorder prediction 453 480 - -
Bva04g02077 480 Gene3D MFS general substrate transporter like domains 357 441 IPR036259 -
Bva04g02077 480 PANTHER NITRATE TRANSPORTER 1 357 448 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02077 Bva-Chr4 20344722 20348091 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02077 357 459 Organic Solute Cotransporters AT1G68570 49.091 1.28e-25 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02077 - - gmx:100794603 546.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g02077 04 20344722 20348091 Bva04g02077 04 20344722 20348091 ECH