Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02060 ATGGGTTCTTCTACGGCTTCATGCTGTGTTCTTATTCTGCTCTATTTCTTCACGTTGgtttgtctttcttttgttcGCCTGGCTGGTTCTAACCAGACCGCAACATTAGCTGTCAATGCTTCTGGTGGAAAACCAATTCCTGATACTTTTTTTGGAATATTCTTTGAGGAAATAAATCATGCTGGTGCTGGGGGATTGTGGGCAGAGCTCGTGAGCAACAGAGGTTTTGAAGCTGGGGGTCCCAACACTCCCTCAAATATTGATCCTTGGTCAATTATTGGAGACGAATCATCAATAATTGTGTCAACTGATCGTAGCTCTCCCTTTGAACTTAATAAGGTTGCTCTACAAATGGTGGTTCTCTGTGACAGTCAAGATGGCAATATCTGCCCAGCTGGCGGAGTTGGAGTATATAACCCTGGTTTCTGGGGCATGAATATTGAGCAAGGGAAGAAATACAAAGTGATCTTATATGTTCGTTCAACAGGACCAGTTAATCTTAAAGTTTCATTGACTGGATCAAATGGTGTAGGAGAGCTGGCTTCAACAGACATCATACTTTCTGAATCTGATGTTTCAGACTGGACTAAGGTAGACACTACATTAGAAGCCAATGCAACAAATCATAATTCAAGACTTCAATTAACAACAACCAGGAAAGGTGTGATATGGTTGGACCAAGTTTCTGCTATGCCTGAGGACACATACAAGGGACATGGTTTCCGTAGTGAGCTGGTTGAAATGCTGGCAGATCTGAAACCAAGATTTGTCAGATTTCCGGGTGGTTGTTTTGTTGAAGGAGAGTGGTTAAGAAATGCTTTTCGGTGGAAAGCAACCGTTGGACCGTGGGAGGAGAGACCTGGGCACTTCGGTGATGTTTGGAAGTACTGGACTGATGATGGACTTGGCTATTTTGAGTTTCTTCAACTAGCAAAGGACCTTGGTGCACTACCGATATGGGTGTTTAACAATGGTATCAGCCATAATGATCAAGTTGCTACTTCTTCTGTCTTACCTTTTGTGCAAGAAGCCCTTGATGGTATTGAATTTGCAAGAGGTGATCCCACTTCAAAATGGGGTTCTCTTAGAGCTGCCATGGGACATCCAGAGCCATTTGACTTGAAATATGTTGCTATTGGAAATGAAGATTGTGGGAAGAGGAATTATCGAGGAAACTACCTTAAGTACTACAGCGCCATAAGACATGCCTATCCAGATATCCAACTGATCTCAAATTGTGATGCTTCTTCACGACCATTAGATCACCCAGCTCATATGTATGATTATCATGTTTATACAAATGCCAATGACATGTTTTCTAGGGCACACATATTCGATCATGCACTGCGAAACGGTCCAAAGGCATTTGTTAGTGAGTATGCTGTGACTGGAAGAGATGCTGGGAAAGGAAGCCTTTTGGCCGCCCTCGCTGAAGCTGGATTCCTTATTGGACTTGAAATGAACAGTGATATTGTCCATATGATTAGCTATGCACCACTTTTTGTAAATGCAAACGACAGGAGGTGGAATCCGGATGCAATTGTTTTCAACTCTTATCAGCTTTATGGAACTCCTAGCTATTGGGTGCAGCAGTTTTTCAGAGAGTCAAGTGGAGCAACTGTTCTTGATACAACTCTTAATacaacttcttcttcttctcttattGCTTCTGCTATTGCTTGGCAAAATTCTGCAGATGAGAAAAATTACATACGAATAAAGGTTGTGAACTTTGGAAGTGACACAGTGAGCCTCCAGATATCCATTGATGGATTGGACCCGAAGTCTTTGCAGTTGTCTGGGTCAACAAAGACTGTGCTCACATCTGCTAATGTAATGGATGAGAATACCTTCTCACAGCCTAAGAAGGTGGTGCCAACACCAAGTCGACTCGAGAGTGCTGCTGGCCAGGACATGAATGTCCAACTCCCTCCACATTCATTCACCTCCTTTGATTTGTTGAAAGAATCAATTAATCTCAAAATGGCAGGGACCGATTCTTCCACAAGATCATCtattta 2021 0.4186 MGSSTASCCVLILLYFFTLVCLSFVRLAGSNQTATLAVNASGGKPIPDTFFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWSIIGDESSIIVSTDRSSPFELNKVALQMVVLCDSQDGNICPAGGVGVYNPGFWGMNIEQGKKYKVILYVRSTGPVNLKVSLTGSNGVGELASTDIILSESDVSDWTKVDTTLEANATNHNSRLQLTTTRKGVIWLDQVSAMPEDTYKGHGFRSELVEMLADLKPRFVRFPGGCFVEGEWLRNAFRWKATVGPWEERPGHFGDVWKYWTDDGLGYFEFLQLAKDLGALPIWVFNNGISHNDQVATSSVLPFVQEALDGIEFARGDPTSKWGSLRAAMGHPEPFDLKYVAIGNEDCGKRNYRGNYLKYYSAIRHAYPDIQLISNCDASSRPLDHPAHMYDYHVYTNANDMFSRAHIFDHALRNGPKAFVSEYAVTGRDAGKGSLLAALAEAGFLIGLEMNSDIVHMISYAPLFVNANDRRWNPDAIVFNSYQLYGTPSYWVQQFFRESSGATVLDTTLNTTSSSSLIASAIAWQNSADEKNYIRIKVVNFGSDTVSLQISIDGLDPKSLQLSGSTKTVLTSANVMDENTFSQPKKVVPTPSRLESAAGQDMNVQLPPHSFTSFDLLKESINLKMAGTDSSTRSSI 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02060 673 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1-LIKE 1 672 - -
Bva04g02060 673 Gene3D Glycosidases 217 533 - -
Bva04g02060 673 Gene3D - 534 653 IPR013780 -
Bva04g02060 673 SUPERFAMILY Galactose-binding domain-like 69 229 IPR008979 -
Bva04g02060 673 SUPERFAMILY (Trans)glycosidases 210 542 IPR017853 -
Bva04g02060 673 Pfam Alpha-L-arabinofuranosidase C-terminal domain 459 647 IPR010720 GO:0046373|GO:0046556
Bva04g02060 673 PANTHER ALPHA-L-ARABINOFURANOSIDASE 1 1 672 - -
Bva04g02060 673 SMART alpha_l_af_c 458 647 IPR010720 GO:0046373|GO:0046556
Bva04g02060 673 SUPERFAMILY Glycosyl hydrolase domain 524 651 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02060 Bva-Chr4 20226424 20232020 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g02060 7 670 Glycoside Hydrolase AT3G10740 70.149 0.0 967
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02060 K01209 - gmx:100787207 1074.31