Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g02004 ATGGGGGGCGACATATGGCAATTCCCTAATCCTCTTGTTCATTTCCCAGAACCAAAACCCCTCTTAAGCCTACTGTCTATTCACCCGCTTCCCGCTTACCGCTTACTACGCCAAATTATGTATCTTTGCCGACAAATAGTGAGGAAGGCATTGAACCAGTATCAGCGGCCCTTTTCACAAGCCGCCGCAGCTGTCCTGTACCAAGAATCCCCTGAAGGAAAGAATATTGCCGCCAAGGAGCGCAAGGCGGGTCGCGTACCCAGCATCGTCTTCGAACAAGAGGATGGCGAGCACGGTGGCAACAAACGCCTCATTTCCATTCAAACCAATCAGATCCGGAAACTCGTCAATCATCTCGGTCGATCATTCTTTTTGTCCAGACTTTTCGATCTCGAGGTCAGGGCAGACTCCGAGTCCCAAGATATTGTCGAGAAAGTTCGGGTTTTACCGAGAGGGCTTCATCTGCATGCATGCACGGATGCACCATTGAATGTCACATTCATAAGGGCTCCATCACATGCTTTATTGAAAGTTGATGTTCCTCTTGTATTCAGAGGTGAAGATGTGTGCCCTGGACTTAGGAAAGGTTCTTCTTTGAATACCATCAAAAGGACTGTCAAGTACCTATGCCCTGCAGACATTGTCCCGCCATATATCGATGTGGACTTGAGTGAATTAGATGTCGGCCAGAAAATAGTTATGGGAGATCTCAAGGTTCACCCTGCATTAAAACTTCTTCAATCAAAAGATGAACCCGTTTGTAAAATTATGGGAGCAAGGGCTTCTGACCAACAGAGGAAATCTAAGTA 809 0.4697 MGGDIWQFPNPLVHFPEPKPLLSLLSIHPLPAYRLLRQIMYLCRQIVRKALNQYQRPFSQAAAAVLYQESPEGKNIAAKERKAGRVPSIVFEQEDGEHGGNKRLISIQTNQIRKLVNHLGRSFFLSRLFDLEVRADSESQDIVEKVRVLPRGLHLHACTDAPLNVTFIRAPSHALLKVDVPLVFRGEDVCPGLRKGSSLNTIKRTVKYLCPADIVPPYIDVDLSELDVGQKIVMGDLKVHPALKLLQSKDEPVCKIMGARASDQQRKSK 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g02004 269 Gene3D Ribosomal protein L25, beta domain 174 265 IPR037121 -
Bva04g02004 269 Pfam Ribosomal protein TL5, C-terminal domain 176 259 IPR020057 -
Bva04g02004 269 Gene3D Ribosomal Protein L25; Chain P 65 170 IPR020056 -
Bva04g02004 269 SUPERFAMILY Ribosomal protein L25-like 72 258 IPR011035 GO:0006412
Bva04g02004 269 CDD Ribosomal_L25_TL5_CTC 73 169 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Bva04g02004 269 Pfam Ribosomal L25p family 73 167 IPR029751 GO:0003735|GO:0005840|GO:0006412|GO:0008097
Bva04g02004 269 PANTHER RIBOSOMAL PROTEIN L25/GLN-TRNA SYNTHETASE, ANTI-CODON-BINDING DOMAIN-CONTAINING PROTEIN 51 267 - -
Bva04g02004 269 PANTHER BNAA01G13300D PROTEIN 51 267 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g02004 Bva-Chr4 19927987 19930934 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g02004 K02897 - csv:101205251 350.132