Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01988 ATGGAAGCTAAACCTAGCCGGTTTTACGAGGATTTTGATCCTGTCTGCAAGTGGCGTAGAGATGAAGGCCGTGACACCCTTGAAGTTCATCTTCCCGGGTTCAGGAGGGAACAAATACGAGTCCGGGTGAACCATGTTGGTTCTGTAACGATAAGCGGAGAGCGACCGTTGGATGGAACACGATGGAAGCGTTTCAAAAAAGAAGTTGAACTTCCAAGGTTCTGTAACGTAAACGGCATTCATGCCAATTTCATGCAGAGCATTCTTACTGTCGTAATGCCTAAGAAAATGCCACCAGTTCCTCAGAAAGAACAAGAGATCAGACAAATATCTGAAGATGAACACGATGAAAtacaagaggaagaagaagaagtcaATCGTCGTCGGTATGAATTTAGAGGATGGAGAATCAGAGAATTAGAAGGTAAACACAGACGCCATGAAGATGATATTGATGCAGCACATGACCATCATCAACATGATCATGATCGTCAACATGatcttcatcatcaacatGATCATCATCATCCACATGATGATTATCGTGGACATGATGATGAGTTTGTGGAACAATATGATTCTGGGTTATCACCGGAGACAACCAGAGATGTTACCTTCAAGTTAATGATTGTGGTCATTGTGATATTGGTCATAGCAAGTTATATATCAGACATGTTCAAAAGCATCATGGTTCATTCCTTTCACTTTTA 710 0.3944 MEAKPSRFYEDFDPVCKWRRDEGRDTLEVHLPGFRREQIRVRVNHVGSVTISGERPLDGTRWKRFKKEVELPRFCNVNGIHANFMQSILTVVMPKKMPPVPQKEQEIRQISEDEHDEIQEEEEEVNRRRYEFRGWRIRELEGKHRRHEDDIDAAHDHHQHDHDRQHDLHHQHDHHHPHDDYRGHDDEFVEQYDSGLSPETTRDVTFKLMIVVIVILVIASYISDMFKSIMVHSFHF 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01988 236 Coils Coil 104 128 - -
Bva04g01988 236 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 6 113 IPR002068 -
Bva04g01988 236 CDD ACD_sHsps-like 18 95 - -
Bva04g01988 236 PANTHER HEAT SHOCK PROTEIN 26 5 231 IPR045045 -
Bva04g01988 236 PANTHER HSP20/ALPHA CRYSTALLIN FAMILY PROTEIN 5 231 - -
Bva04g01988 236 Gene3D - 1 98 IPR008978 -
Bva04g01988 236 MobiDBLite consensus disorder prediction 153 185 - -
Bva04g01988 236 Pfam Hsp20/alpha crystallin family 19 107 IPR002068 -
Bva04g01988 236 Coils Coil 137 157 - -
Bva04g01988 236 SUPERFAMILY HSP20-like chaperones 7 106 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01988 Bva-Chr4 19854989 19856106 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01988 - - ahf:112696952 169.474