Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01986 ATGGCAATGCAGaCTGAGACAGTTCAAGTAAAGCCTGTTTCAGATCTAGCTACTGAGACAGATATTCGCGAATTTTTCTCGTTCTCTGGAGAAATTGAGCACATTGAGATACGAAGTGAATCTGAGCAACCGAAGACTGCATTTGTGACATTTAAAGACCCCAAAGCGCTTGAAATTGCACTATTGTTATCGGGAGCAACACTGGTAGACCAGATAGTGAGTATAACTCCAGCTGAGAACTATGTAGCAAAACATGAGATGCAGGAAGTAAGGATGGTGGAAAATGCCACAAATGTTGCTTCTGATGAAAACATCTCACCAAATGTTGAGCGTGACCAAGCCATCCCAACTACCAATGGAAGAATTTACATTAGTAGAGCACAAGATGTAGTAACAAGTGTGCTGGCAAAAGGTTCAGCAATAGGACAAGATGCTATGAACAAAGCTAAAGCATTTGATGAAAAGCATAAGTTGACTGCTAATGCATCTGCAAAGGTCATCTCTTTAGACAAGAAAGTTGGACTGACAGAGAAATTGACAGTTGGCATTTCTGTGGTCAACGAGAAGGTGAAGTATGTTGATCAGAGGCTTCATGTTTCAGATAAAACAATGGCAGCAATTCTTGCAGCTGAGAGGAAGTTGAATGATACTGGATCAGCTGTTAAAACAAGCAGATATGTGACTGCTGGAACAGCATGGTTAAACGGCGCCTTTACCAAGGTGGCAAAGGCTGGGCAAGTTGCTGGTacaaaaacaagagagaagtTCCATTTGGCTGTATCAAACTTGACAGCAAAGGAACCATCAGTTGCTGCATA 818 0.4108 MAMQTETVQVKPVSDLATETDIREFFSFSGEIEHIEIRSESEQPKTAFVTFKDPKALEIALLLSGATLVDQIVSITPAENYVAKHEMQEVRMVENATNVASDENISPNVERDQAIPTTNGRIYISRAQDVVTSVLAKGSAIGQDAMNKAKAFDEKHKLTANASAKVISLDKKVGLTEKLTVGISVVNEKVKYVDQRLHVSDKTMAAILAAERKLNDTGSAVKTSRYVTAGTAWLNGAFTKVAKAGQVAGTKTREKFHLAVSNLTAKEPSVAA 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01986 272 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 6 80 IPR000504 GO:0003723
Bva04g01986 272 PANTHER SERINE/ARGININE-RICH SPLICING FACTOR 2 272 - -
Bva04g01986 272 Gene3D - 2 92 IPR012677 -
Bva04g01986 272 PANTHER RNA BINDING (RRM/RBD/RNP MOTIFS) FAMILY PROTEIN-RELATED 2 272 - -
Bva04g01986 272 SUPERFAMILY RNA-binding domain, RBD 7 83 IPR035979 GO:0003676
Bva04g01986 272 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 13 67 IPR000504 GO:0003723
Bva04g01986 272 SMART rrm1_1 7 76 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01986 Bva-Chr4 19846536 19850439 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01986 - - mnt:21397849 405.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01986 04 19846536 19850439 Bva04g01986 04 19846536 19850439 ECH