Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01981 ATGAACAAGATGACTTTGGAAGAGAAAATTGGTCAAATGGTGCAGATTGACCGCAGTGTTGCTTCTGCTGAGGTCatgaagaattattttattgGGAGTCTGCTGAGTGGGGGAGGGAGTGTCCCCAAGAAGCAGGCTTCTGCAGAGGATTGGATTAACATGGTGAATGAATTTCAAAAGGGTTCTTTATCCACGAGGCTAGGAATCCCAATGATTTATGGGATTGATGCCGTTCATGGCCATAACAACGTTTACAAGGCAACAATTTTCCCTCACAACATCGGTCTTGGAGCCACAAGGGACCCTGAACTTGTTAAGAAGATTGGAGCTGCAACTGCTCTTGAAGTTAGAGCAACTGGAATTCCATATGTCTTTGCACCTTGTATAGCGGTCTGTAGAGATCCAAGGTGGGGTCGTTGTTATGAAAGTTACAGCGAAGATCCCACATTAGTGCAAGCCATGACTGAGCTCATACCAGGACTACAGGGTGATATCCCTGCCAACTCCAGAAAGGGTGTTCCCTTTGTCGCTGGAAAGAAGAAAGTTGCAGCCTGCGCTAAGCACTATGTGGGTGACGGTGGAACAACCGAAGGAATTAACGAGAACAACACAGTAATAGATAGACATGGATTGCTTAGCATTCACATGCCAGGCTACTATAATTCCATTATCAAGGGCGTGGCCACCGTCATGGTCTCTTACTCAAGCTGGAATGGAGTGAAAATGCATGCTAACCGTGATCTAGTTACTGGCTTTCTAAAGAACACACTTCGCTTTAGGGGTTTTGTTATATCAGATTGGCAAGGAATTGACAGGATTACCACCCCACCTCATGCTAACTACTCCTATTCTATTCAAGCAGGAATCACTGCTGGGATTGATATGATAATGGTCCCCTACAACTATACAGAATTCATAGACGGCCTTACCTCACAGgttataaacaaaatcataCCCATGAGTAGAATTGATGATGCAGTGAAGAGGATTTTGCGGGTTAAATTTGTGATGGGTCTTTTTGAAAACCCATTGGCTGATAGTAGCCTTGTCAACCAGCTTGGTAGTCAGGAGCATAGGGAATTGGCTAGAGAAGCAGTGAGGAGATCACTGGTCCTGTTAAAGAATGGCAAAGATGCCAATAAACCATTACTCCCTCTTACTAAAAAGGCTTCAAAAATACTTGTTGCTGGAAGCCATGCAGATAATCTAGGCTATCAGTGTGGTGGCTGGACCATTGAATGGCAAGGAGTTAGTGGCAACAATGTCACTAGTGGGACTACAATTCTCTCTGCCATAAAAAACACAGTTGACAAAGATACCAAAGTGGTGTACAAGGAGAACCCTGATGAGAAATTTTTGAACTCCAACAAAGACTTCTCCTTTGCCATTGTGGTAGTTGGGGAGCTACCATATGCAGAAACAAACGGTGACAGCTTGAATTTGACAATCCCAGAGCCAGGGCCAAGCACTATAACCCATGTCTGTGGAGCAATGAAATGTGTTGTCATTGTCATCTCTGGTCGCCCTGTTGTTATAAAACCATATCTTGATTCAATGGATGCTCTTGTTGCTGCTTGGCTTCCAGGCAGTGAAGGTCAAGGTGTGGCCGATGTCTTGTTTGGTGACTACGGTTTCACGGGCAAGCTTCCGAGGACTTGGTTCAAGAGTGTTGATCAGCTGCCAATGAATGTCGGTGATGCTCATTATGACCCTCTTTTCCAATTTGGATTTGGCCTTACAACAAAACCCAGCAAAGCCACTTA 1763 0.4407 MNKMTLEEKIGQMVQIDRSVASAEVMKNYFIGSLLSGGGSVPKKQASAEDWINMVNEFQKGSLSTRLGIPMIYGIDAVHGHNNVYKATIFPHNIGLGATRDPELVKKIGAATALEVRATGIPYVFAPCIAVCRDPRWGRCYESYSEDPTLVQAMTELIPGLQGDIPANSRKGVPFVAGKKKVAACAKHYVGDGGTTEGINENNTVIDRHGLLSIHMPGYYNSIIKGVATVMVSYSSWNGVKMHANRDLVTGFLKNTLRFRGFVISDWQGIDRITTPPHANYSYSIQAGITAGIDMIMVPYNYTEFIDGLTSQVINKIIPMSRIDDAVKRILRVKFVMGLFENPLADSSLVNQLGSQEHRELAREAVRRSLVLLKNGKDANKPLLPLTKKASKILVAGSHADNLGYQCGGWTIEWQGVSGNNVTSGTTILSAIKNTVDKDTKVVYKENPDEKFLNSNKDFSFAIVVVGELPYAETNGDSLNLTIPEPGPSTITHVCGAMKCVVIVISGRPVVIKPYLDSMDALVAAWLPGSEGQGVADVLFGDYGFTGKLPRTWFKSVDQLPMNVGDAHYDPLFQFGFGLTTKPSKAT 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01981 587 PRINTS Glycosyl hydrolase family 3 signature 90 109 IPR001764 GO:0004553|GO:0005975
Bva04g01981 587 PRINTS Glycosyl hydrolase family 3 signature 136 152 IPR001764 GO:0004553|GO:0005975
Bva04g01981 587 PRINTS Glycosyl hydrolase family 3 signature 252 270 IPR001764 GO:0004553|GO:0005975
Bva04g01981 587 PRINTS Glycosyl hydrolase family 3 signature 182 198 IPR001764 GO:0004553|GO:0005975
Bva04g01981 587 PRINTS Glycosyl hydrolase family 3 signature 66 82 IPR001764 GO:0004553|GO:0005975
Bva04g01981 587 SUPERFAMILY (Trans)glycosidases 1 369 IPR017853 -
Bva04g01981 587 Gene3D - 355 582 IPR036881 GO:0004553|GO:0005975
Bva04g01981 587 Pfam Glycosyl hydrolase family 3 N terminal domain 5 333 IPR001764 GO:0004553|GO:0005975
Bva04g01981 587 Gene3D - 1 354 IPR036962 GO:0004553|GO:0005975
Bva04g01981 587 Pfam Glycosyl hydrolase family 3 C-terminal domain 370 580 IPR002772 GO:0004553|GO:0005975
Bva04g01981 587 PANTHER BETA-D-GLUCOSIDE GLUCOHYDROLASE 1 585 - -
Bva04g01981 587 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 370 580 IPR036881 GO:0004553|GO:0005975
Bva04g01981 587 PANTHER PERIPLASMIC BETA-GLUCOSIDASE-RELATED 1 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01981 Bva-Chr4 19818447 19821746 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva04g01981 1 585 Glycoside Hydrolase AT5G20950 78.120 0.0 933
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01981 K05349 - jre:108997931 1060.06