Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01978 ATGGTTCGTCCTTCATTGTTTTACTATTACTCTCAGCCCCGTCCTTCTGGTTCATTCAGGGGCTTCTTCATACCAACACCTTTGGCTCTCTTAACCTCTTTCATCATTGTCTCTTATATTTACTCAACCTCCCACCTCTTTACTCATCATCACCACACAACTTCTCGCTTCAGTTCATCCTCTGCCTTTGTCTCAACCTTCTCTTCTCCGACCCCTCTTCCGATCCCAGTTTcattctcaaacaaaaatgattCTAATTGGTCTAAAAATCACACCTTGGAATCAGCTGCTGGCAAAGGATCAGAAAGTCAACGGAGTCCTCCACCCCAATTGAGTTCAAATGGAAAATCTGAGAACAACGACGACGTGTTCCATGATAGAGATATCTTTCTGGAAGACTATAAAGAAATGAACAAGAGCTTCAAGATATATGTTTACCCTCACAGGAAAGATGACCCTTTTGCAAATGTGCTGTTACCTGTTAAATATGAACCTGGTGGCAATTATGCCAGTGAAAGTTACTTCAAAAGGGTCCTCATGAAAAGCCACTTCATTACCAAAGATCCAACAAAGGCAGATCTTTTCTTTCTGCCTTTTTCCATTGCAAGTATGCGGAATGACCGTAGGATTGGCGTGGGAGGCATCCAAGACTTTATCAGAGACTACATTTCTAATATCAGCCAAAGCTATCCCTATTGGAACAGGACAGGTGGTGCTGATCACTTTTATGTTGCTTGTCATTCTATTGGAAAGTCTGCCATGGATAAAGCAGACCAGGTGAAATTCAATGCCATTCAAGTAGTGTGCTCATCAAGTTTTTTCATTAGAGGGTACCTTGCTCATAAGGATGCGTGTCTACCACAAATTTGGCCAAGAAAAGGAGATCCCCCCAACCTTGTTTCGTCAAAGAGGAAAAAGCTTGCTTTCTTTGCTGGAGCAGTTAATTCCCGGGTACGAGAACAGCTTGTTGAGAGCTGGAGGACTGACCCAGAAATCTTTGCTCACGCTGGACGACTCAAAACACCTTACGCTGATGAGTTGCTAGGAAGCAAGTTCTGTCTTCATGTCAAAGGCTTCGAAGTGAACACAGCTCGCATAGGAGATTCACTATATTATGGCTGTGTTCCAGTAATCATTGCAGACTACTATGACCTTCCATTTGCAGACGTATTGAACTGGAAGAGCTTTTCAGTGGTTGTCCCTTCAATGGATATACCTTTGCTGAAAAAGATCCTCAAAGGTATAAGTTTTGAAGAGTATTTAAGATTACAGAGCAATGTGTTGAAGGTGCGGAAGCACTTTCAATGGCACTCATCCCCGGTTGACTTTGATGTTTTCTACATGACCATGTTTGAGTTATGGCTTCGACGAAGTACCATCAAAGTTTCTTTGGGTGATTCTGTGGGACCCCATTA 1415 0.4219 MVRPSLFYYYSQPRPSGSFRGFFIPTPLALLTSFIIVSYIYSTSHLFTHHHHTTSRFSSSSAFVSTFSSPTPLPIPVSFSNKNDSNWSKNHTLESAAGKGSESQRSPPPQLSSNGKSENNDDVFHDRDIFLEDYKEMNKSFKIYVYPHRKDDPFANVLLPVKYEPGGNYASESYFKRVLMKSHFITKDPTKADLFFLPFSIASMRNDRRIGVGGIQDFIRDYISNISQSYPYWNRTGGADHFYVACHSIGKSAMDKADQVKFNAIQVVCSSSFFIRGYLAHKDACLPQIWPRKGDPPNLVSSKRKKLAFFAGAVNSRVREQLVESWRTDPEIFAHAGRLKTPYADELLGSKFCLHVKGFEVNTARIGDSLYYGCVPVIIADYYDLPFADVLNWKSFSVVVPSMDIPLLKKILKGISFEEYLRLQSNVLKVRKHFQWHSSPVDFDVFYMTMFELWLRRSTIKVSLGDSVGPH 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01978 471 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 85 461 IPR004263 GO:0006486|GO:0016757
Bva04g01978 471 Pfam Exostosin family 138 413 IPR040911 -
Bva04g01978 471 PANTHER EXOSTOSIN-LIKE PROTEIN-RELATED 85 461 - -
Bva04g01978 471 MobiDBLite consensus disorder prediction 90 118 - -
Bva04g01978 471 MobiDBLite consensus disorder prediction 90 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01978 Bva-Chr4 19803148 19804996 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01978 - - gmx:100798319 660.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01978 04 19803148 19804996 Bva04g01978 04 19803148 19804996 ECH