Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01976 ATGGCGGCCGATCCGACTCAGGTGCAACTCGCTCTCATTCTCGGTGCGGACTCTACGCACTTTGAATCCCTAATTTCGAACCTTATGTCCACGACGAATGAGCTACGCTCTCAAGCCGAGTCTGTTTTCAACCTCTGTAAGGAAACTCATCCCGATGCCCTCTGTCTTAAGCTTGCCCATCATCTGCAATATTCCCCTCATCCCGAAGCTCGAACCATGTCTGCAATTTTGCTTCGCAGACAACTCACGCCTGAAGACTCGTGGCTGTGGCCCCGACTCGCTACCACAACTCAGTCATCCATTAAATCGGTTCTTCTTGGTTGCCTTCAGTCCGAAGATGTTAAATCGATTACTAAAAAGCTTTGTGATACGGTTTCGGAGCTTGCCTCGGGGATTTTGCCCGATGGCGGCTGGCCCGAGCTCTTACCTTTCATGTTTCAGTGTGTAACTTCGGATAATACGAAATTGCAGGAGGTGGCTTTATTGATTTTCAGTCAATTGGCTCATTATATTAGCGAAGCCCTAGTCTCTCAACTAGGTACCCTTCACTCGATGTTCTTTTCATGTCTGAGCTCTTCCAAGAGTTCGGATGTGAGAATTGCTGCTTTGGGTGCcagcattaattttattcagtGTTTGTCGAGTGCTTCCGATAGGGATAGATTCCAGGATTTATTGCCGCTCATGATGCAGACGTTAACGGAAGCATTGAATTGTGGTCAGGAAGCTACGGCCCAAGAAGCACTTGAATTGTTGATTGAGTTGGCTGGAACTGAGCCAAGGTTCTTAAGAAGGCAACTTGTTGATGTGGTGGGTTCAATGTTACAGATTGCTGAGGCAGAATCCCTGGAAGAAGGGACTAGGCATTTGGCCATTGAATTTGTCATAACTCTTGCAGAAGCGAGAGAGCGTGCCCCCGGGATGATGAGAAAGTTGCCACAGTTCATAAGGAGGTTGTTTGCCATATTGATGAATATGTTGTTGGATATCGAGGATGATCCTGCATGGCATAGTGCGGAAACGGAGGACGAGGATGCAGGAGAGACTAGTAATTACGGTTTTGGACAGGAGTGCTTGGATAGACTATCAATTTCATTGGGTGGAAATACGGTTGTACCGGTTGCTTCAGAGTTGTTGCCTACTTACTTGGCTGCACCTGAATGGCAAAAGCGCCATGCTACACTTATTGCACTTGCACAAATTGCAGAGGGCTGTTCAAAGGTGATGATCAAGAATCTGGAGCAGGTAGTTTCAATGGTTTTAAATCCATTTCAAGATGCCAACCCCCGTGTGAGATGGGCAGCTATAAATGCAATTGGGCAATTGTCCACAGATTTGGGACCAGACTTGCAGGTTCAATATCACCACTTAGTGTTGCCCGCAGTAGCTGGATCAATGGATGATTTCCAAAATCCCCGAGTACAGGCTCATGCAGCTTCTGCAGTGCTAAATTTCACTGAGAACTGTGCCCCAGATATCTTAACACCTTACTTAGATGGGATTGTGAGCAAACTCCTTGTACTTTTACAGAATGGGAAGCAAATGGTTCAAGAAGGGGCTTTGACAGCTTTAGCATCAGTTGCAGATTCATCACAGGAGCAATTTCAGAAGTATTATGATGCTGTGATGCCTTTCTTGAAAGCTATTTTGATGAATGCTAATGATAAATCTAATCGCATGCTTCGTGCTAAAGCGATGGAGTGCATTAGTTTGGTAGGAATGGctgttggaaaagaaaagttccGGGAAGATGCCAAGCAGGTCATGGATGTCTTGATGTCTCTGCAACAATCTCAATTAGAGACTGATGATCCAACTGCAAGTTACATGTTACAAGCATGGGCAAGACTTTGCAAGTGCCTTGGGCAGGATTTTCTCCCATACATGGGTTATGTTATGCCCCCTTTGCTGCAGTCTGCTCAACTGAAGCCTGATGTGACCATTACATCTGCAGATTCTGATGCTGaaattgatgaagatgatgacaGCATTGAAACGATCACTCTTGGAGATAAAAGAATAGGCATTAAGACCAGTGTCCTGGAAGAGAAAGCTACAGCTTGTAACATGCTATGTTGCTATGCGGATGAGTTGAAGGAAGGATTTTTTCCTTGGATTGACCAGGTTGCTTTCACATTAGTTCCTCTTCTTAAATTCTATTTCCATGAAGAAGTTAGGAAGGCAGCTGTTTCAGCCATGCCTGAACTGTTGCGTTCAGCTAAATTAGCTGTAGAGAAGGGACAATCACAAGGTCGTGATGAAACCTATATAAAGCAGTTGTCTGATTACATAATACCGAATTTGGTGGAGGCTCTACATAAGGAGCCAGAGATGGAAATTTGTGCAAGTATGTTGGATGCATTAAACGAATGCATGCAGATCTCTGGAAGACATCTAGATGAAAAGCAAGTACGGAGCATTGTTGATGAGATTAAACAGGTCATTACTGCTAGTTCATCCAGAAAGCATGAAAGAGCAGAGAGGGCTAAAGAAGAGGACTTTGAtgcagaagaaagagaagtactaaaggaagaaaatgagcaAGAAGAAGAACTTTTTGATCAAGTTGGTGATTGCTTGGGGACCTTGATAAAAACATTCAGAGGATCTTTCTTACCTTTCTTTGCTGAGCTTTCTTCATACCTAATACCAATGTTGGGAAAAGATAAATCCTCAGAGGAAAGGAGAATTGCAATATGTATATTTGATGATGTTGTTGAGCACTGTCATGAAGCAGCTCTTAAATATTATGATTCTTACCTTCCGTTCTTGCTGGAAGCATGTAATGATGAATATCCAGATGTTCGGCAGGCAGCTGTTTATGGGGTCGGTGTTTGTGCAGAGTTTGGTGGGTCTGTGTTCAAACCCCTTGTTGGAGAGGCACTGTCAAGGTTAGATACTGTGATAAGGCATCCAAATGCACTACATTCAGATAATGTCATGGCATATGACAATGCTGTTTCAGCCCTTGGTAAAATATGCCAGTTTCATCGTGATAGCATAAATGCAACACAGATTGTTCCGGCCTGGCTAAGTTGCTTGCCAATAAAAGGTGATTTGATTGAGGCTAAGGTTGTGCATGAGCAGCTTTGTTCAATGGTGGAAAGGTCAGACAGAGAACTTTTGGGTCCCAACCATCAATATCTTTCAAAAATAGTTGCTGTTTTTGCTGAGGTTCTATGTGCGGGTAATGATCTGGCAACTGAACAGACTACCAGTCGgatgattaatttattgaggCAACTTCAGCAGACGTTACCACCTTCTACCCTTGCTTCAACATGGTCAACCTTGCAGCCTCAGCAGCAGCTAGCACTTCAATCCATCCTGTCATCCTA 3338 0.4275 MAADPTQVQLALILGADSTHFESLISNLMSTTNELRSQAESVFNLCKETHPDALCLKLAHHLQYSPHPEARTMSAILLRRQLTPEDSWLWPRLATTTQSSIKSVLLGCLQSEDVKSITKKLCDTVSELASGILPDGGWPELLPFMFQCVTSDNTKLQEVALLIFSQLAHYISEALVSQLGTLHSMFFSCLSSSKSSDVRIAALGASINFIQCLSSASDRDRFQDLLPLMMQTLTEALNCGQEATAQEALELLIELAGTEPRFLRRQLVDVVGSMLQIAEAESLEEGTRHLAIEFVITLAEARERAPGMMRKLPQFIRRLFAILMNMLLDIEDDPAWHSAETEDEDAGETSNYGFGQECLDRLSISLGGNTVVPVASELLPTYLAAPEWQKRHATLIALAQIAEGCSKVMIKNLEQVVSMVLNPFQDANPRVRWAAINAIGQLSTDLGPDLQVQYHHLVLPAVAGSMDDFQNPRVQAHAASAVLNFTENCAPDILTPYLDGIVSKLLVLLQNGKQMVQEGALTALASVADSSQEQFQKYYDAVMPFLKAILMNANDKSNRMLRAKAMECISLVGMAVGKEKFREDAKQVMDVLMSLQQSQLETDDPTASYMLQAWARLCKCLGQDFLPYMGYVMPPLLQSAQLKPDVTITSADSDAEIDEDDDSIETITLGDKRIGIKTSVLEEKATACNMLCCYADELKEGFFPWIDQVAFTLVPLLKFYFHEEVRKAAVSAMPELLRSAKLAVEKGQSQGRDETYIKQLSDYIIPNLVEALHKEPEMEICASMLDALNECMQISGRHLDEKQVRSIVDEIKQVITASSSRKHERAERAKEEDFDAEEREVLKEENEQEEELFDQVGDCLGTLIKTFRGSFLPFFAELSSYLIPMLGKDKSSEERRIAICIFDDVVEHCHEAALKYYDSYLPFLLEACNDEYPDVRQAAVYGVGVCAEFGGSVFKPLVGEALSRLDTVIRHPNALHSDNVMAYDNAVSALGKICQFHRDSINATQIVPAWLSCLPIKGDLIEAKVVHEQLCSMVERSDRELLGPNHQYLSKIVAVFAEVLCAGNDLATEQTTSRMINLLRQLQQTLPPSTLASTWSTLQPQQQLALQSILSS 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01976 1112 Coils Coil 827 847 - -
Bva04g01976 1112 Pfam HEAT repeats 382 481 - -
Bva04g01976 1112 Pfam Interferon-related developmental regulator (IFRD) 485 621 IPR007701 -
Bva04g01976 1112 SUPERFAMILY ARM repeat 20 951 IPR016024 -
Bva04g01976 1112 SMART TOG_3 365 613 IPR034085 -
Bva04g01976 1112 Pfam Importin repeat 282 373 IPR041653 -
Bva04g01976 1112 Pfam Importin repeat 6 781 886 IPR041389 -
Bva04g01976 1112 PANTHER IMPORTIN BETA 11 1111 IPR040122 GO:0006606
Bva04g01976 1112 Pfam HEAT repeat 921 948 IPR000357 GO:0005515
Bva04g01976 1112 ProSiteProfiles HEAT repeat profile. 416 454 IPR021133 -
Bva04g01976 1112 PANTHER BNAC09G37860D PROTEIN 11 1111 - -
Bva04g01976 1112 Gene3D - 18 1111 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01976 Bva-Chr4 19789698 19797690 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01976 K20222 - zju:107432702 1836.62
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01976 04 19789698 19797690 Bva04g01976 04 19789698 19797690 ECH