Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01970 ATGGCTTCTCTGAGCAATTCGACCAACATATTTTGGCAAGAATGCCCAGTGGGAAAGCTTGACCGGCAGAAGCTACTTAACCAAAAGGGATGTGTTGTATGGATTACAGGTCTCAGCGGATCAGGAAAAAGCACGTTGGCATGTTCACTAAGCAGAGAACTGCACTCGAGGGGAAAATTAGCTTATGTCCTTGATGGAGATAATCTTCGGCATGGCCTAAACAAAGATCTTGGCTTTAAACCCGAAGACCGCACTGAAAATATACGCAGAACCGGGGAAGTAGCAAAACTCTTTGCCGATGCTGGTTTAATATGTGTTGCCAGTCTGATATCTCCGTATAGAAAAGATCGAGACACTTGCCGTGCTATGTTGCCCGATAAAAACTTTATTGAGGTTTTCATGAACATGCCTCTAGATTTGTGCGAGGCGCGAGATCCCAAAGGCCTGTATAGGCTTGCACGTGCAGGAAAGATAAAAGGATTTACTGGCATTGACGATCCTTACGAACCACCCTTAAATTGCGAGATAGAAATACAACAGACCAATGGAGTTTGTCCAGCACCCACTGCCATGGCTGGACAAGTAGTCTCTTACTTACAGGAAAAAGGTTTTCTAGAATATCAGTA 626 0.4441 MASLSNSTNIFWQECPVGKLDRQKLLNQKGCVVWITGLSGSGKSTLACSLSRELHSRGKLAYVLDGDNLRHGLNKDLGFKPEDRTENIRRTGEVAKLFADAGLICVASLISPYRKDRDTCRAMLPDKNFIEVFMNMPLDLCEARDPKGLYRLARAGKIKGFTGIDDPYEPPLNCEIEIQQTNGVCPAPTAMAGQVVSYLQEKGFLEYQ 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01970 208 Pfam Adenylylsulphate kinase 29 181 - -
Bva04g01970 208 Gene3D - 2 206 IPR027417 -
Bva04g01970 208 PANTHER ADENYLYL-SULFATE KINASE 1, CHLOROPLASTIC 1 206 - -
Bva04g01970 208 PANTHER BIFUNCTIONAL 3'-PHOSPHOADENOSINE 5'-PHOSPHOSULFATE SYNTHASE 1 206 - -
Bva04g01970 208 CDD APSK 32 178 IPR002891 GO:0000103|GO:0004020|GO:0005524
Bva04g01970 208 TIGRFAM apsK: adenylyl-sulfate kinase 12 180 IPR002891 GO:0000103|GO:0004020|GO:0005524
Bva04g01970 208 Hamap Adenylyl-sulfate kinase [cysC]. 28 203 IPR002891 GO:0000103|GO:0004020|GO:0005524
Bva04g01970 208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 201 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01970 Bva-Chr4 19764251 19765696 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01970 K00860 - qsu:111994901 387.882
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01970 04 19764251 19765696 Bva04g01970 04 19764251 19765696 ECH