Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01967 ATGAGACCTCCTAGAGGTGGCGGACGCGGCGGGGGATTTAGGGGCGGTCGGGATGGTGGCCGTGGAAGAGGCGGCCGTTCGGGCTTTGGACGTGGAGGCGGTGGCTTTCGTGACGAAGGTCCACCAACTGAAGTCGTAGAGATCTCGACATTTCTTCATGCATGTGAAGGGGACGCAGTCACAAAGCTTACAAATGAGAAAATCCCCTTCTTTAATGCCCCTATATATCTGCAGAACATGACTCAGATTGGGAAAGTCGATGAAATATTTGGCCCAATTAATGAATCCtacttttcaataaaaatgatggAAGGGATTATCGCTACTTCATACTCTCCGGGTGACAAGTTTTATATTGACCCAAGGAAACTTTTGCCGCTTGCAAGATTTCTTCCACAACCAAAGGGACAACCACAAGCTGCTGGCGGAGGTGGAGGCCGTGGTGGCTTTCGTGGCGGGGGCAGAGGTGGTGGCTTTCGTGGAGGTGGTGGCTTTCGTGGCAGAGGTGGCCCAAGGGGTGGACGAGGTCCTCCCAGAGGTGGTGGCCGTGGTGGTGGTTTCAGGGGAAGAGGGAGATCATA 581 0.5232 MRPPRGGGRGGGFRGGRDGGRGRGGRSGFGRGGGGFRDEGPPTEVVEISTFLHACEGDAVTKLTNEKIPFFNAPIYLQNMTQIGKVDEIFGPINESYFSIKMMEGIIATSYSPGDKFYIDPRKLLPLARFLPQPKGQPQAAGGGGGRGGFRGGGRGGGFRGGGGFRGRGGPRGGRGPPRGGGRGGGFRGRGRS 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01967 193 PANTHER H/ACA RIBONUCLEOPROTEIN COMPLEX SUBUNIT 1 193 - -
Bva04g01967 193 MobiDBLite consensus disorder prediction 1 42 - -
Bva04g01967 193 Gene3D Probable tRNA pseudouridine synthase domain 41 132 IPR038664 -
Bva04g01967 193 Pfam Gar1/Naf1 RNA binding region 45 131 IPR007504 GO:0001522|GO:0042254
Bva04g01967 193 PANTHER NUCLEOLAR PROTEIN FAMILY A MEMBER 1 SNORNP PROTEIN GAR1 1 193 - -
Bva04g01967 193 SUPERFAMILY Translation proteins 46 120 IPR009000 -
Bva04g01967 193 MobiDBLite consensus disorder prediction 132 193 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01967 Bva-Chr4 19751349 19753483 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01967 K11128 - jre:108983586 213.772
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva06g02791 06 17523228 17527718 Bva04g01967 04 19751349 19753483 BWGD
Bva04g01967 04 19751349 19753483 Bva04g01967 04 19751349 19753483 ECH