Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01964 ATGGCCGCCGCTGCTCCTTCCGCGGATAATGCTGCAGATTTATTGCAGAACTTGTCCTTGAATCCTGATTCCAAGACCATTGAAATGTCCGAGTCCGCAAAGAAGACTGGATCTGTTTTTTCCGTTGGTCGTAATGGGATGGCCGAGCCATTTATTCCAAATGCATACCCTTCTACTGCATTTTATTGTAGAGGTTACGATGGGCAAGGTAATGATTGGAATGGGCATTCCAGATATATGAACATTGATGGAGGTATGGCTCAATGTGTTTATGGAGATGGTTACTCTTATACGGATCATAAGGGTTATGGTTATACACCATATGGAGCATATCCACCACCTGGTTCATCTGTTTCATCTATGCAACACCATGGTCAGCTTTATGGGCTTCAACAGTACCAGTACCCTTGTCCTTATTACCATTCTTCAGCTTCGAACGATTCTTTGAATAAGGGAAACTGCAGTGGCAAGGCCAATGATGATTGCGCAAATGAGATAAAGGCACTTCTAAACTCATCTTTGACGTGTAATGATTCTGATCAAAGGGCTAGCAGTGCCTCATTATTTTCTGATAGGCAGTCCAAACAAGGAGAAAGAGCTGGATTATCTTCTAATCTAATGCCTCTTCCTCAATTTACAAACTTGCTTGGTGCAAGGCCAACATCTGGTTTGGAAATGACTTTGGGACGCAAGAGTGGGACATATCCAAGCATCAGGATGTACAGCCAGTATAGAAACACATTCGGATCTAATTCTCATTTTGGATCTGCTTCTTTTGGATCTAGAATAGGATCTGTTGATAACAGGCTTAAAGCCACAAGAAACAGCTATGGTGGTGTTGATCATGGCAAAAAGAATACGGATGGCTTTAGTGAGCTGAGTAAGGGACCGAGAGCCAAGAATTCTGAtagtaaaaatggaaaaggtcTTGAACCTGTCACATTACTAGTCAAGGGACAGAGCCTTCCGATGATAAGTGATAACAAAGAGGTGCCTGTAGTTCCTAGAGAGCAACAGTACAACAGAGAAGAATTTTCTGAGAATTATTCCGgtgcaaaattttttgttattaaatccTATAGCGAGGATGACATccataaaagcataaaatatagtgtttggGCAAGCACCCCTAGTGGCAACAAAAAGCTGCACACAGCATATCAAGAAGCCAAGGAGAAGCCTGGCGGATGTCCCATATTTTTGCTATTTTCAGTCAATACGAGTGGACAATTTGTTGGTTTAGCAGAGATGGTGGGTCCTGTTGATTTTGATAGAACTGTAGAATATTGGCAGCAGGACAAGTGGACAGGTTGCTTTCCTGTGAAGTGGCATATCGTAAAGGATGTCCCAAATAGTGTGTTAAGGCACATAACGCTggaaaacaatgaaaacaaGCCGGTGACCAATAGTAGGGATACTCAGGAGGTTAAGTTTGAGAAGGGCAttgaaattctcaaaattttcaaggcACATTCCAGCAAAACATGCATCCTTGATGATTTTGGgttttatgaaagaaaatctaGGGAACAATTGTTCCAGAAACAGGTCAACAAACCCAATGATTTAAGTTTAACCACTATCGGGAGAGTTGCATTACCCGAGTCTCTTGATGGAACCTTGGTGAATAAATTAGCAAGTGCAGATGCAGCAGTAAGGGTGGATGCGGTGGTAAAGCTGTCAGAAGAGAATGGATTGAAAACAGCATCAGAAGAACCTTCAGCTGCTAAATCAATGACAGTGCCGGACAGAGAACTGGCTTCAAGTGGAGATGCCAGTGTCTGCTA 1790 0.4011 MAAAAPSADNAADLLQNLSLNPDSKTIEMSESAKKTGSVFSVGRNGMAEPFIPNAYPSTAFYCRGYDGQGNDWNGHSRYMNIDGGMAQCVYGDGYSYTDHKGYGYTPYGAYPPPGSSVSSMQHHGQLYGLQQYQYPCPYYHSSASNDSLNKGNCSGKANDDCANEIKALLNSSLTCNDSDQRASSASLFSDRQSKQGERAGLSSNLMPLPQFTNLLGARPTSGLEMTLGRKSGTYPSIRMYSQYRNTFGSNSHFGSASFGSRIGSVDNRLKATRNSYGGVDHGKKNTDGFSELSKGPRAKNSDSKNGKGLEPVTLLVKGQSLPMISDNKEVPVVPREQQYNREEFSENYSGAKFFVIKSYSEDDIHKSIKYSVWASTPSGNKKLHTAYQEAKEKPGGCPIFLLFSVNTSGQFVGLAEMVGPVDFDRTVEYWQQDKWTGCFPVKWHIVKDVPNSVLRHITLENNENKPVTNSRDTQEVKFEKGIEILKIFKAHSSKTCILDDFGFYERKSREQLFQKQVNKPNDLSLTTIGRVALPESLDGTLVNKLASADAAVRVDAVVKLSEENGLKTASEEPSAAKSMTVPDRELASSGDASVC 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01964 596 PANTHER EVOLUTIONARILY CARBOXY-TERMINAL REGION PROTEIN 1 151 - -
Bva04g01964 596 PANTHER EVOLUTIONARILY CARBOXY-TERMINAL REGION PROTEIN 184 576 - -
Bva04g01964 596 MobiDBLite consensus disorder prediction 185 206 - -
Bva04g01964 596 Gene3D ph1033 like domains 333 503 - -
Bva04g01964 596 MobiDBLite consensus disorder prediction 566 596 - -
Bva04g01964 596 ProSiteProfiles YTH domain profile. 352 489 IPR007275 GO:0003723
Bva04g01964 596 MobiDBLite consensus disorder prediction 275 310 - -
Bva04g01964 596 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 1 151 IPR045168 -
Bva04g01964 596 PANTHER YTH YT521-B HOMOLOGY DOMAIN-CONTAINING 184 576 IPR045168 -
Bva04g01964 596 Pfam YT521-B-like domain 352 490 IPR007275 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01964 Bva-Chr4 19734659 19738506 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01964 - K20102 gmx:100803547 630.172
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01964 04 19734659 19738506 Bva04g01964 04 19734659 19738506 ECH