Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01936 ATGGCCTCGGCTACTCTTTCTGTAGCCAAACCAGCTCTTCAGGCTAATGGGAAGGGCTTTTCTGAATTCTCTGGTCTCCGCAGTTCATCACTTCCCTTTTCCAGGAAAGCCTCAGATGACTTCCATTCAGTTATTGCCTTCCAAACCTCAGCAGTTGGGACTAGCGGATCCAGAAAAGGTGTGACAGAAGCAAAATTGAAGGTGGCCATAAATGGTTTTGGTAGAATTGGAAGGAACTTCTTGAGGTGCTGGCATGGGCGCAAGGATTCTCCTTTGGATGTGATTGCCATCAATGACTCTGGAGGTGTGAAGCAGGCTTCCCACCTTCTCAAGTATGACTCCATCCTCGGTACCTTCGATGCTGATGTTAAGCCTGCTGGTGACAAAGCCATCTCTGTTGATGGAAAGATCATCAAGGTTGTGACTGACCGCAACCCCCTAAACCTCCCCTGGAAGGACTTGGGTATCGACTTGGTGATTGAAGGAACAGGTGTGTTTGTGGACAGAGAAGGTGCTGGGAAGCACATCCAAGCAGGGGCCAAGAAGGTGCTCATCACAGCTCCTGGCAAAGGAGACATTCCCACCTACGTGCTTGGTGTGAATGCTGATGCTTACAACCCAGATGAACCCATAATCAGCAATGCCTCTTGCACCACCAACTGCCTTGCCCCCTTCGTCAAGGTCCTCGACCAGAAATTTGGCATTATCAAGGGCACCATGACTACAACTCACTCCTACACCGGTGACCAGAGGCTGCTCGACGCCAGCCACCGGGACTTGAGGCGTGCGAGGGCAGCTGCTCTCAACATTGTCCCCACATCAACAGGAGCAGCCAAAGCCGTGGCCCTTGTCCTCCCAAATCTGAAGGGGAAGCTCAATGGCATTGCCCTTCGTGTTCCCACACCAAACGTTTCAGTGGTGGACCTTGTTGTGCAGGTGTCCAAGAAGACTTTTGCTGAAGAAGTGAACGCTGCATTCAGAGAAAGCGCAGAGAAGGAGCTGAAGGGTATTCTAGAGGTGTGTGATGAACCACTTGTGTCAGTAGATTTTAGGTGCTCTGATGTCTCATCCACTGTTGACTCGTCTTTGACAATGGTAATGGGAGATGACCTTGTCAAGGTTATTGCTTGGTATGACAATGAGTGGGGTTACTCACAAAGGGTTGTGGATTTGGCTGACATTGTTGCCAACAACTGGAAATG 1202 0.5025 MASATLSVAKPALQANGKGFSEFSGLRSSSLPFSRKASDDFHSVIAFQTSAVGTSGSRKGVTEAKLKVAINGFGRIGRNFLRCWHGRKDSPLDVIAINDSGGVKQASHLLKYDSILGTFDADVKPAGDKAISVDGKIIKVVTDRNPLNLPWKDLGIDLVIEGTGVFVDREGAGKHIQAGAKKVLITAPGKGDIPTYVLGVNADAYNPDEPIISNASCTTNCLAPFVKVLDQKFGIIKGTMTTTHSYTGDQRLLDASHRDLRRARAAALNIVPTSTGAAKAVALVLPNLKGKLNGIALRVPTPNVSVVDLVVQVSKKTFAEEVNAAFRESAEKELKGILEVCDEPLVSVDFRCSDVSSTVDSSLTMVMGDDLVKVIAWYDNEWGYSQRVVDLADIVANNWK 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01936 400 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 2 1 400 IPR020831 GO:0016620
Bva04g01936 400 TIGRFAM GAPDH-I: glyceraldehyde-3-phosphate dehydrogenase, type I 67 390 IPR006424 GO:0006006|GO:0016620|GO:0050661|GO:0051287
Bva04g01936 400 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 1 400 - -
Bva04g01936 400 Gene3D - 67 392 - -
Bva04g01936 400 PIRSF GAPDH 64 400 IPR020831 GO:0016620
Bva04g01936 400 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 334 349 IPR020831 GO:0016620
Bva04g01936 400 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 175 188 IPR020831 GO:0016620
Bva04g01936 400 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 294 311 IPR020831 GO:0016620
Bva04g01936 400 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 211 229 IPR020831 GO:0016620
Bva04g01936 400 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 238 254 IPR020831 GO:0016620
Bva04g01936 400 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 217 379 - -
Bva04g01936 400 Pfam Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain 67 168 IPR020828 GO:0051287
Bva04g01936 400 SMART gp_dh_n_7 66 217 IPR020828 GO:0051287
Bva04g01936 400 Gene3D Dihydrodipicolinate Reductase; domain 2 216 380 - -
Bva04g01936 400 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 222 378 IPR020829 GO:0016620
Bva04g01936 400 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 65 233 IPR036291 -
Bva04g01936 400 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 215 222 IPR020830 GO:0016620
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01936 Bva-Chr4 19579810 19582091 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01936 K05298 - gmx:732655 699.123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01936 04 19579810 19582091 Bva04g01936 04 19579810 19582091 ECH