Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva04g01908 ATGGAAGATAGTTTCAGAGATCGCGTGGACAAAGTGTTTGGCTCtttaatttcatcttcatcGTCGTCCACTGCGCCATCGTCTCTCAGCTCTCTGTGGTCTCTCACCGACGACGAGGTCGAGAAGAGGGAATGGGATCGGAGCAAGGACAGCCCCGAACGGGAACCCGAACCGAACCGGCATTCATCGCCTTTCATAAAACAGGGAAAAGGGTCCGGAAAGAGCTCTACCGGCTTCCGAGATGGACTGGAGGAGGACCTGGATGATCTTGACGATGATCAAGATGAAGTGCCAAGGTCGAAGCCCGACGattatgatgatgaagagTGGCAAATCAGGTTGGCTATCGGCCGTGATTCTACCCTGGATTACGAGGAAGAGGAAGATCGATATGATAAACAGGCTATTGGGAAAGAGAATCAAGGGGATCGCGTTTATATGAAGGATATAAATGACGATGGGGTAGATATAGATTCTTGCAATGTCCTTCCTACTTCGGTTTTTGATTTTGTGAGAGACCCACGTGCTAACCACTTGGCTGCAAAACTCAGGCTAAAGGAAGATGCTGAAGCGGCTAAAAGAATTGATGCTTTGCGTGTCTCTGAGAAACCTGCACCAGACAATGAATCAGCTCAATGGAAAACATCAGAGGATAGTTTGAACcccaaatcaattttgaaGAGGAAAGATAATCCTTCAGAATCCAAGTCCCGGAAACGCGTTCGATTTGACCCTGAATGTGATGAAAGAAGTAATGAAGAGTCTGACGGAGCAAAAGATACACGCATAAAGACATCATCAGTGGATGAGGCAACCGTTTCAAACCAATCATCTAAGCGCTCTCAAGAATTCACCTCCACGGTTCCAGATTATATTCGAAATCCTTCGAGATACACTCATTATACTTTTGATTCTTCAAGCGACGTGGATGATGAATCCAATAAGCAAGCATGTATGGACTTTCTTTCGCAGCTCAGGAGTTCAAAGACTGCTGCTGAATCACAGGCAAACGATGTTTTGGATGATCTTCCATCTGTTACCTTTATATCGAAGAAGAAATCTGATGCCACAATGGTAGAGAATGCTGCTGTGCCAAAGCAAAGCATCGATTTAAGCAAGGAGTTCATGCTGAGGGAAACTGGAAGCAGTGACGTTATTGCAATGGAGGAGGATGGACCACCAGTAACAGATGATATCAAAAAGAGCTCACAGAGGTTGAACCGCCAATACAGGAAGAAAGCCCAGGATGAATTGGACGAGGCTGTTGTCTA 1271 0.4437 MEDSFRDRVDKVFGSLISSSSSSTAPSSLSSLWSLTDDEVEKREWDRSKDSPEREPEPNRHSSPFIKQGKGSGKSSTGFRDGLEEDLDDLDDDQDEVPRSKPDDYDDEEWQIRLAIGRDSTLDYEEEEDRYDKQAIGKENQGDRVYMKDINDDGVDIDSCNVLPTSVFDFVRDPRANHLAAKLRLKEDAEAAKRIDALRVSEKPAPDNESAQWKTSEDSLNPKSILKRKDNPSESKSRKRVRFDPECDERSNEESDGAKDTRIKTSSVDEATVSNQSSKRSQEFTSTVPDYIRNPSRYTHYTFDSSSDVDDESNKQACMDFLSQLRSSKTAAESQANDVLDDLPSVTFISKKKSDATMVENAAVPKQSIDLSKEFMLRETGSSDVIAMEEDGPPVTDDIKKSSQRLNRQYRKKAQDELDEAVV 423
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva04g01908 423 MobiDBLite consensus disorder prediction 393 423 - -
Bva04g01908 423 MobiDBLite consensus disorder prediction 15 35 - -
Bva04g01908 423 MobiDBLite consensus disorder prediction 221 266 - -
Bva04g01908 423 PANTHER TUMOR SUPPRESSING SUBTRANSFERABLE CANDIDATE 4 TSSC4 1 418 IPR029338 -
Bva04g01908 423 PANTHER BNAC09G30840D PROTEIN 1 418 - -
Bva04g01908 423 MobiDBLite consensus disorder prediction 15 140 - -
Bva04g01908 423 MobiDBLite consensus disorder prediction 267 298 - -
Bva04g01908 423 MobiDBLite consensus disorder prediction 383 423 - -
Bva04g01908 423 MobiDBLite consensus disorder prediction 94 140 - -
Bva04g01908 423 Coils Coil 411 423 - -
Bva04g01908 423 Pfam Tumour suppressing sub-chromosomal transferable candidate 4 223 338 IPR029338 -
Bva04g01908 423 MobiDBLite consensus disorder prediction 196 298 - -
Bva04g01908 423 MobiDBLite consensus disorder prediction 36 61 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva04g01908 Bva-Chr4 19422899 19424701 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva04g01908 - - gmx:100819106 428.328
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva04g01908 04 19422899 19424701 Bva04g01908 04 19422899 19424701 ECH